RNA–Protein interactions for RNA: ENST00000509351.5

VNN3-211, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-211ENST00000509351 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
VNN3-211ENST00000509351 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
VNN3-211ENST00000509351 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
VNN3-211ENST00000509351 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
VNN3-211ENST00000509351 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
VNN3-211ENST00000509351 FOXD1Q16676 465 aa14.99□□□□□ -0.01
VNN3-211ENST00000509351 MSH5O43196 834 aa14.53□□□□□ -0.08
VNN3-211ENST00000509351 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
VNN3-211ENST00000509351 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
VNN3-211ENST00000509351 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
VNN3-211ENST00000509351 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
VNN3-211ENST00000509351 ADRA2BP18089 450 aa12.98□□□□□ -0.33
VNN3-211ENST00000509351 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
VNN3-211ENST00000509351 KCNA4P22459 653 aa12.54□□□□□ -0.4
VNN3-211ENST00000509351 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
VNN3-211ENST00000509351 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
VNN3-211ENST00000509351 POTEHQ6S545 545 aa12.36□□□□□ -0.43
VNN3-211ENST00000509351 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
VNN3-211ENST00000509351 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
VNN3-211ENST00000509351 RNF39Q9H2S5 420 aa12.26□□□□□ -0.45
VNN3-211ENST00000509351 SLC4A1APQ9BWU0 796 aaKnown RBP12.08□□□□□ -0.47
VNN3-211ENST00000509351 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
VNN3-211ENST00000509351 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
VNN3-211ENST00000509351 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
VNN3-211ENST00000509351 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
VNN3-211ENST00000509351 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
VNN3-211ENST00000509351 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
VNN3-211ENST00000509351 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
VNN3-211ENST00000509351 ZBTB22O15209 634 aa11.58□□□□□ -0.56
VNN3-211ENST00000509351 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
VNN3-211ENST00000509351 DNAJC5BQ9UF47 199 aa11.52□□□□□ -0.57
VNN3-211ENST00000509351 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
VNN3-211ENST00000509351 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
VNN3-211ENST00000509351 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
VNN3-211ENST00000509351 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.62
VNN3-211ENST00000509351 DSG3P32926 999 aa11.08□□□□□ -0.64
VNN3-211ENST00000509351 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
VNN3-211ENST00000509351 FKBP8Q14318 412 aa11.06□□□□□ -0.64
VNN3-211ENST00000509351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
VNN3-211ENST00000509351 PRKCSHP14314 528 aaPredicted RBP10.88□□□□□ -0.67
VNN3-211ENST00000509351 PLCB2Q00722 1185 aa10.85□□□□□ -0.67
VNN3-211ENST00000509351 CAPN15O75808 1086 aa10.84□□□□□ -0.67
VNN3-211ENST00000509351 CHRDL2Q6WN34 429 aa10.81□□□□□ -0.68
VNN3-211ENST00000509351 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
VNN3-211ENST00000509351 BCANQ96GW7 911 aa10.78□□□□□ -0.68
VNN3-211ENST00000509351 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
VNN3-211ENST00000509351 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
VNN3-211ENST00000509351 ATXN8OSP0DMR3 200 aa10.69□□□□□ -0.7
VNN3-211ENST00000509351 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
VNN3-211ENST00000509351 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
VNN3-211ENST00000509351 SLC4A2P04920 1241 aa10.6□□□□□ -0.71
VNN3-211ENST00000509351 PLSCR2Q9NRY7 297 aa10.59□□□□□ -0.71
VNN3-211ENST00000509351 TPRNQ4KMQ1 711 aa10.57□□□□□ -0.72
VNN3-211ENST00000509351 VSIG10Q8N0Z9 540 aa10.54□□□□□ -0.72
VNN3-211ENST00000509351 MYCNP04198 464 aaPredicted RBP10.53□□□□□ -0.72
VNN3-211ENST00000509351 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
VNN3-211ENST00000509351 APLP2Q06481 763 aa10.48□□□□□ -0.73
VNN3-211ENST00000509351 ABCB7O75027 752 aa10.46□□□□□ -0.74
VNN3-211ENST00000509351 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
VNN3-211ENST00000509351 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
VNN3-211ENST00000509351 TIMELESSQ9UNS1 1208 aa10.41□□□□□ -0.74
VNN3-211ENST00000509351 HAX1O00165 279 aa10.4□□□□□ -0.74
VNN3-211ENST00000509351 TRHP20396 242 aaPredicted RBP10.37□□□□□ -0.75
VNN3-211ENST00000509351 KDM2AQ9Y2K7 1162 aa10.37□□□□□ -0.75
VNN3-211ENST00000509351 LHX8Q68G74 356 aa10.36□□□□□ -0.75
VNN3-211ENST00000509351 ARXQ96QS3 562 aa10.34□□□□□ -0.75
VNN3-211ENST00000509351 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
VNN3-211ENST00000509351 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
VNN3-211ENST00000509351 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
VNN3-211ENST00000509351 FBLN2P98095 1184 aa10.3□□□□□ -0.76
VNN3-211ENST00000509351 ATF5Q9Y2D1 282 aaPredicted RBP10.27□□□□□ -0.77
VNN3-211ENST00000509351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
VNN3-211ENST00000509351 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
VNN3-211ENST00000509351 PKD2Q13563 968 aa10.21□□□□□ -0.77
VNN3-211ENST00000509351 GTF3C3Q9Y5Q9 886 aa10.21□□□□□ -0.78
VNN3-211ENST00000509351 VASPP50552 380 aaPredicted RBP10.2□□□□□ -0.78
VNN3-211ENST00000509351 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
VNN3-211ENST00000509351 EVX2Q03828 476 aa10.18□□□□□ -0.78
VNN3-211ENST00000509351 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
VNN3-211ENST00000509351 PAXIP1Q6ZW49 1069 aaPredicted RBP10.16□□□□□ -0.78
VNN3-211ENST00000509351 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
VNN3-211ENST00000509351 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
VNN3-211ENST00000509351 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
VNN3-211ENST00000509351 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
VNN3-211ENST00000509351 ERICH6Q7L0X2 663 aa10.11□□□□□ -0.79
VNN3-211ENST00000509351 FXR2P51116 673 aaKnown RBP eCLIP10.1□□□□□ -0.79
VNN3-211ENST00000509351 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
VNN3-211ENST00000509351 SPDYE4A6NLX3 237 aa10.07□□□□□ -0.8
VNN3-211ENST00000509351 HOMEZQ8IX15 550 aa10.07□□□□□ -0.8
VNN3-211ENST00000509351 PROM2Q8N271 834 aa10.04□□□□□ -0.8
VNN3-211ENST00000509351 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
VNN3-211ENST00000509351 REM2Q8IYK8 340 aaPredicted RBP10.03□□□□□ -0.8
VNN3-211ENST00000509351 NBR1Q14596 966 aa10.01□□□□□ -0.81
VNN3-211ENST00000509351 TMEM132AQ24JP5 1023 aa9.99□□□□□ -0.81
VNN3-211ENST00000509351 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
VNN3-211ENST00000509351 ECM2O94769 699 aaPredicted RBP9.95□□□□□ -0.82
VNN3-211ENST00000509351 GABBR2O75899 941 aa9.93□□□□□ -0.82
VNN3-211ENST00000509351 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
VNN3-211ENST00000509351 C14orf37Q86TY3 774 aa9.9□□□□□ -0.83
VNN3-211ENST00000509351 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms