RNA–Protein interactions for RNA: ENST00000636822.2

TCF4-281, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-281ENST00000636822 MYT1Q01538 1121 aa9.21□□□□□ -0.94
TCF4-281ENST00000636822 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
TCF4-281ENST00000636822 TTBK1Q5TCY1 1321 aaPredicted RBP8.61□□□□□ -1.03
TCF4-281ENST00000636822 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
TCF4-281ENST00000636822 CENPBP07199 599 aaPredicted RBP8.16□□□□□ -1.1
TCF4-281ENST00000636822 CCER1Q8TC90 406 aaPredicted RBP8.13□□□□□ -1.11
TCF4-281ENST00000636822 SLC24A1O60721 1099 aa8.08□□□□□ -1.12
TCF4-281ENST00000636822 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
TCF4-281ENST00000636822 RANGAP1P46060 587 aaPredicted RBP8.02□□□□□ -1.13
TCF4-281ENST00000636822 DCAF8L2P0C7V8 631 aa7.9□□□□□ -1.15
TCF4-281ENST00000636822 GLIPR1L2Q4G1C9 344 aa7.88□□□□□ -1.15
TCF4-281ENST00000636822 EIF5BO60841 1220 aaKnown RBP7.82□□□□□ -1.16
TCF4-281ENST00000636822 ZEB1P37275 1124 aaPredicted RBP7.79□□□□□ -1.16
TCF4-281ENST00000636822 PCGF6Q9BYE7 350 aa7.79□□□□□ -1.16
TCF4-281ENST00000636822 BCL11AQ9H165 835 aa7.78□□□□□ -1.16
TCF4-281ENST00000636822 RTL5Q5HYW3 569 aaPredicted RBP7.74□□□□□ -1.17
TCF4-281ENST00000636822 NEFLP07196 543 aa7.73□□□□□ -1.17
TCF4-281ENST00000636822 HRCP23327 699 aa7.72□□□□□ -1.17
TCF4-281ENST00000636822 PRKCSHP14314 528 aaPredicted RBP7.66□□□□□ -1.18
TCF4-281ENST00000636822 GTF3C3Q9Y5Q9 886 aa7.62□□□□□ -1.19
TCF4-281ENST00000636822 SUPT5HO00267 1087 aaKnown RBP7.59□□□□□ -1.19
TCF4-281ENST00000636822 DAXXQ9UER7 740 aaPredicted RBP7.58□□□□□ -1.2
TCF4-281ENST00000636822 MYT1LQ9UL68 1186 aa7.57□□□□□ -1.2
TCF4-281ENST00000636822 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
TCF4-281ENST00000636822 EHMT2Q96KQ7 1210 aa7.52□□□□□ -1.21
TCF4-281ENST00000636822 POLR3GLQ9BT43 218 aa7.51□□□□□ -1.21
TCF4-281ENST00000636822 PPARGC1BQ86YN6 1023 aaKnown RBP7.5□□□□□ -1.21
TCF4-281ENST00000636822 PODXL2Q9NZ53 605 aa7.49□□□□□ -1.21
TCF4-281ENST00000636822 ANP32EQ9BTT0 268 aa7.48□□□□□ -1.21
TCF4-281ENST00000636822 ZNF316A6NFI3 1004 aaPredicted RBP7.48□□□□□ -1.21
TCF4-281ENST00000636822 ACIN1Q9UKV3 1341 aaKnown RBP7.47□□□□□ -1.21
TCF4-281ENST00000636822 SCAF1Q9H7N4 1312 aaKnown RBP7.44□□□□□ -1.22
TCF4-281ENST00000636822 FAM9AQ8IZU1 332 aaPredicted RBP7.42□□□□□ -1.22
TCF4-281ENST00000636822 SHROOM4Q9ULL8 1493 aa7.39□□□□□ -1.23
TCF4-281ENST00000636822 TNNT2P45379 298 aaPredicted RBP7.36□□□□□ -1.23
TCF4-281ENST00000636822 CDK11BP21127 795 aaKnown RBP7.36□□□□□ -1.23
TCF4-281ENST00000636822 CDK11AQ9UQ88 783 aaPredicted RBP7.35□□□□□ -1.23
TCF4-281ENST00000636822 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.23
TCF4-281ENST00000636822 PKNOX2Q96KN3 472 aa7.33□□□□□ -1.24
TCF4-281ENST00000636822 APLP2Q06481 763 aa7.33□□□□□ -1.24
TCF4-281ENST00000636822 ZNF326Q5BKZ1 582 aaKnown RBP7.32□□□□□ -1.24
TCF4-281ENST00000636822 NCLP19338 710 aaKnown RBP7.31□□□□□ -1.24
TCF4-281ENST00000636822 BCANQ96GW7 911 aa7.3□□□□□ -1.24
TCF4-281ENST00000636822 NBR1Q14596 966 aa7.3□□□□□ -1.24
TCF4-281ENST00000636822 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
TCF4-281ENST00000636822 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.3□□□□□ -1.24
TCF4-281ENST00000636822 A0A0U1RQG5 324 aaPredicted RBP7.29□□□□□ -1.24
TCF4-281ENST00000636822 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
TCF4-281ENST00000636822 ANP32AP39687 249 aaKnown RBP7.26□□□□□ -1.25
TCF4-281ENST00000636822 NISCHQ9Y2I1 1504 aa7.26□□□□□ -1.25
TCF4-281ENST00000636822 AMER1Q5JTC6 1135 aaPredicted RBP7.25□□□□□ -1.25
TCF4-281ENST00000636822 CCDC136Q96JN2 1154 aa7.24□□□□□ -1.25
TCF4-281ENST00000636822 NEUROD1Q13562 356 aa7.21□□□□□ -1.26
TCF4-281ENST00000636822 VSIG10Q8N0Z9 540 aa7.2□□□□□ -1.26
TCF4-281ENST00000636822 TRIM44Q96DX7 344 aaPredicted RBP7.2□□□□□ -1.26
TCF4-281ENST00000636822 CSRNP3Q8WYN3 585 aa7.2□□□□□ -1.26
TCF4-281ENST00000636822 ERICH6BQ5W0A0 696 aa7.2□□□□□ -1.26
TCF4-281ENST00000636822 PDE4CQ08493 712 aa7.19□□□□□ -1.26
TCF4-281ENST00000636822 NAP1L5Q96NT1 182 aaPredicted RBP7.19□□□□□ -1.26
TCF4-281ENST00000636822 HAP1P54257 671 aaPredicted RBP7.18□□□□□ -1.26
TCF4-281ENST00000636822 DEKP35659 375 aaKnown RBP7.18□□□□□ -1.26
TCF4-281ENST00000636822 ANP32BQ92688 251 aaKnown RBP7.17□□□□□ -1.26
TCF4-281ENST00000636822 PTMSP20962 102 aa7.15□□□□□ -1.26
TCF4-281ENST00000636822 CNGB1Q14028 1251 aaPredicted RBP7.15□□□□□ -1.27
TCF4-281ENST00000636822 HSP90AA1P07900 732 aaKnown RBP7.12□□□□□ -1.27
TCF4-281ENST00000636822 ZBTB47Q9UFB7 747 aaPredicted RBP7.12□□□□□ -1.27
TCF4-281ENST00000636822 ANO8Q9HCE9 1232 aaPredicted RBP7.12□□□□□ -1.27
TCF4-281ENST00000636822 C14orf37Q86TY3 774 aa7.11□□□□□ -1.27
TCF4-281ENST00000636822 APPP05067 770 aa7.1□□□□□ -1.27
TCF4-281ENST00000636822 NEFMP07197 916 aa7.09□□□□□ -1.27
TCF4-281ENST00000636822 HOMEZQ8IX15 550 aa7.09□□□□□ -1.27
TCF4-281ENST00000636822 PLEKHG5O94827 1062 aa7.08□□□□□ -1.28
TCF4-281ENST00000636822 NPM2Q86SE8 214 aaKnown RBP7.08□□□□□ -1.28
TCF4-281ENST00000636822 UBE2Q2Q8WVN8 375 aa7.08□□□□□ -1.28
TCF4-281ENST00000636822 HSP90AA2PQ14568 343 aaPredicted RBP7.07□□□□□ -1.28
TCF4-281ENST00000636822 PDIA4P13667 645 aaKnown RBP7.05□□□□□ -1.28
TCF4-281ENST00000636822 FKBP8Q14318 412 aa7.05□□□□□ -1.28
TCF4-281ENST00000636822 RSPH6AQ9H0K4 717 aa7.05□□□□□ -1.28
TCF4-281ENST00000636822 ARXQ96QS3 562 aa7.04□□□□□ -1.28
TCF4-281ENST00000636822 TULP1O00294 542 aaPredicted RBP7.04□□□□□ -1.28
TCF4-281ENST00000636822 TNNT3P45378 269 aaPredicted RBP7.02□□□□□ -1.29
TCF4-281ENST00000636822 TIMELESSQ9UNS1 1208 aa7.01□□□□□ -1.29
TCF4-281ENST00000636822 CALRP27797 417 aaKnown RBP7.01□□□□□ -1.29
TCF4-281ENST00000636822 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
TCF4-281ENST00000636822 TAF7LQ5H9L4 462 aa7□□□□□ -1.29
TCF4-281ENST00000636822 ARID4BQ4LE39 1312 aaPredicted RBP6.99□□□□□ -1.29
TCF4-281ENST00000636822 DNTTIP2Q5QJE6 756 aaKnown RBP6.98□□□□□ -1.29
TCF4-281ENST00000636822 SALL2Q9Y467 1007 aaPredicted RBP6.97□□□□□ -1.29
TCF4-281ENST00000636822 TRIM41Q8WV44 630 aa6.96□□□□□ -1.29
TCF4-281ENST00000636822 NCBP3Q53F19 620 aaKnown RBP6.96□□□□□ -1.29
TCF4-281ENST00000636822 NOP58Q9Y2X3 529 aaKnown RBP6.96□□□□□ -1.3
TCF4-281ENST00000636822 PATL2C9JE40 543 aaKnown RBP6.95□□□□□ -1.3
TCF4-281ENST00000636822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.94□□□□□ -1.3
TCF4-281ENST00000636822 ITGAEP38570 1179 aa6.93□□□□□ -1.3
TCF4-281ENST00000636822 PNNQ9H307 717 aaKnown RBP6.93□□□□□ -1.3
TCF4-281ENST00000636822 ATP1B4Q9UN42 357 aaPredicted RBP6.93□□□□□ -1.3
TCF4-281ENST00000636822 PPM1GO15355 546 aaPredicted RBP6.93□□□□□ -1.3
TCF4-281ENST00000636822 ZNF526Q8TF50 670 aaPredicted RBP6.91□□□□□ -1.3
TCF4-281ENST00000636822 USP35Q9P2H5 1018 aa6.9□□□□□ -1.3
TCF4-281ENST00000636822 HMGB1P09429 215 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms