RNA–Protein interactions for RNA: ENST00000550290.2

AC048341.2-201, humanhuman

TSL 4 BASIC

Gene AC048341.2, Length 8,693 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048341.2-201ENST00000550290 NISCHQ9Y2I1 1504 aa11.65□□□□□ -0.54
AC048341.2-201ENST00000550290 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
AC048341.2-201ENST00000550290 ABCC9O60706 1549 aa10.8□□□□□ -0.68
AC048341.2-201ENST00000550290 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
AC048341.2-201ENST00000550290 SHROOM4Q9ULL8 1493 aa10.41□□□□□ -0.74
AC048341.2-201ENST00000550290 CCDC180Q9P1Z9 1646 aa10.08□□□□□ -0.8
AC048341.2-201ENST00000550290 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
AC048341.2-201ENST00000550290 SCRIBQ14160 1630 aa9.92□□□□□ -0.82
AC048341.2-201ENST00000550290 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
AC048341.2-201ENST00000550290 EHMT2Q96KQ7 1210 aa9.74□□□□□ -0.85
AC048341.2-201ENST00000550290 DNAJC5BQ9UF47 199 aa9.71□□□□□ -0.85
AC048341.2-201ENST00000550290 NACADO15069 1562 aa9.71□□□□□ -0.86
AC048341.2-201ENST00000550290 TTBK1Q5TCY1 1321 aaPredicted RBP9.64□□□□□ -0.87
AC048341.2-201ENST00000550290 FBLN2P98095 1184 aa9.57□□□□□ -0.88
AC048341.2-201ENST00000550290 ZCCHC6Q5VYS8 1495 aaKnown RBP9.56□□□□□ -0.88
AC048341.2-201ENST00000550290 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
AC048341.2-201ENST00000550290 RANGAP1P46060 587 aaPredicted RBP9.54□□□□□ -0.88
AC048341.2-201ENST00000550290 CECR2Q9BXF3 1484 aa9.52□□□□□ -0.89
AC048341.2-201ENST00000550290 TRIM41Q8WV44 630 aa9.49□□□□□ -0.89
AC048341.2-201ENST00000550290 UNC13AQ9UPW8 1703 aa9.41□□□□□ -0.9
AC048341.2-201ENST00000550290 FAM9AQ8IZU1 332 aaPredicted RBP9.41□□□□□ -0.9
AC048341.2-201ENST00000550290 CC2D2AQ9P2K1 1620 aa9.38□□□□□ -0.91
AC048341.2-201ENST00000550290 ATP1B4Q9UN42 357 aaPredicted RBP9.37□□□□□ -0.91
AC048341.2-201ENST00000550290 BAZ1BQ9UIG0 1483 aaKnown RBP9.3□□□□□ -0.92
AC048341.2-201ENST00000550290 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
AC048341.2-201ENST00000550290 TRHP20396 242 aaPredicted RBP9.29□□□□□ -0.92
AC048341.2-201ENST00000550290 BICRAQ9NZM4 1560 aa9.22□□□□□ -0.93
AC048341.2-201ENST00000550290 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
AC048341.2-201ENST00000550290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.22□□□□□ -0.93
AC048341.2-201ENST00000550290 HNRNPUL2Q1KMD3 747 aaKnown RBP9.22□□□□□ -0.93
AC048341.2-201ENST00000550290 MYT1LQ9UL68 1186 aa9.19□□□□□ -0.94
AC048341.2-201ENST00000550290 DCAF1Q9Y4B6 1507 aa9.17□□□□□ -0.94
AC048341.2-201ENST00000550290 PLPPR3Q6T4P5 718 aa9.17□□□□□ -0.94
AC048341.2-201ENST00000550290 ARID3CA6NKF2 412 aa9.15□□□□□ -0.95
AC048341.2-201ENST00000550290 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.95
AC048341.2-201ENST00000550290 NESP48681 1621 aa9.13□□□□□ -0.95
AC048341.2-201ENST00000550290 WIZO95785 1651 aa9.12□□□□□ -0.95
AC048341.2-201ENST00000550290 MROH2BQ7Z745 1585 aa9.11□□□□□ -0.95
AC048341.2-201ENST00000550290 BAZ1AQ9NRL2 1556 aaPredicted RBP9.1□□□□□ -0.95
AC048341.2-201ENST00000550290 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
AC048341.2-201ENST00000550290 MYO15BQ96JP2 1530 aa9.1□□□□□ -0.95
AC048341.2-201ENST00000550290 CHIC1Q5VXU3 224 aa9.09□□□□□ -0.95
AC048341.2-201ENST00000550290 ATAD2BQ9ULI0 1458 aa9.08□□□□□ -0.96
AC048341.2-201ENST00000550290 SMARCA4P51532 1647 aa9.08□□□□□ -0.96
AC048341.2-201ENST00000550290 PDS5BQ9NTI5 1447 aa9.08□□□□□ -0.96
AC048341.2-201ENST00000550290 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
AC048341.2-201ENST00000550290 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
AC048341.2-201ENST00000550290 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
AC048341.2-201ENST00000550290 AEBP2Q6ZN18 517 aaPredicted RBP9.02□□□□□ -0.97
AC048341.2-201ENST00000550290 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
AC048341.2-201ENST00000550290 RSF1Q96T23 1441 aaPredicted RBP9□□□□□ -0.97
AC048341.2-201ENST00000550290 OSCARQ8IYS5 282 aa8.99□□□□□ -0.97
AC048341.2-201ENST00000550290 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
AC048341.2-201ENST00000550290 FANCD2Q9BXW9 1451 aa8.95□□□□□ -0.98
AC048341.2-201ENST00000550290 TDRD9Q8NDG6 1382 aaKnown RBP8.92□□□□□ -0.98
AC048341.2-201ENST00000550290 CCDC88BA6NC98 1476 aa8.92□□□□□ -0.98
AC048341.2-201ENST00000550290 APLP2Q06481 763 aa8.92□□□□□ -0.98
AC048341.2-201ENST00000550290 NCAPD3P42695 1498 aa8.9□□□□□ -0.98
AC048341.2-201ENST00000550290 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
AC048341.2-201ENST00000550290 SOGA1O94964 1423 aa8.87□□□□□ -0.99
AC048341.2-201ENST00000550290 KIF21AQ7Z4S6 1674 aa8.85□□□□□ -0.99
AC048341.2-201ENST00000550290 MRC2Q9UBG0 1479 aa8.85□□□□□ -0.99
AC048341.2-201ENST00000550290 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
AC048341.2-201ENST00000550290 TOP2AP11388 1531 aaKnown RBP8.83□□□□□ -1
AC048341.2-201ENST00000550290 AQRO60306 1485 aaKnown RBP eCLIP8.83□□□□□ -1
AC048341.2-201ENST00000550290 ARID4BQ4LE39 1312 aaPredicted RBP8.81□□□□□ -1
AC048341.2-201ENST00000550290 RAD54L2Q9Y4B4 1467 aa8.8□□□□□ -1
AC048341.2-201ENST00000550290 DNAJC5Q9H3Z4 198 aa8.79□□□□□ -1
AC048341.2-201ENST00000550290 LAMC3Q9Y6N6 1575 aa8.78□□□□□ -1
AC048341.2-201ENST00000550290 ABCC8Q09428 1581 aa8.78□□□□□ -1
AC048341.2-201ENST00000550290 HMGXB3Q12766 1538 aa8.77□□□□□ -1.01
AC048341.2-201ENST00000550290 ZNF777Q9ULD5 760 aaPredicted RBP8.77□□□□□ -1.01
AC048341.2-201ENST00000550290 CUX2O14529 1486 aa8.76□□□□□ -1.01
AC048341.2-201ENST00000550290 ITGAEP38570 1179 aa8.75□□□□□ -1.01
AC048341.2-201ENST00000550290 SENP3Q9H4L4 574 aaPredicted RBP8.75□□□□□ -1.01
AC048341.2-201ENST00000550290 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
AC048341.2-201ENST00000550290 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
AC048341.2-201ENST00000550290 MLECQ14165 292 aa8.72□□□□□ -1.01
AC048341.2-201ENST00000550290 LOC105371045A0A1W2PR82 267 aa8.71□□□□□ -1.01
AC048341.2-201ENST00000550290 FAM69CQ0P6D2 419 aa8.7□□□□□ -1.02
AC048341.2-201ENST00000550290 FGD5Q6ZNL6 1462 aa8.68□□□□□ -1.02
AC048341.2-201ENST00000550290 BCANQ96GW7 911 aa8.68□□□□□ -1.02
AC048341.2-201ENST00000550290 JPH4Q96JJ6 628 aa8.67□□□□□ -1.02
AC048341.2-201ENST00000550290 ZNF608Q9ULD9 1512 aaPredicted RBP8.67□□□□□ -1.02
AC048341.2-201ENST00000550290 SNAPC4Q5SXM2 1469 aa8.67□□□□□ -1.02
AC048341.2-201ENST00000550290 TOPBP1Q92547 1522 aa8.65□□□□□ -1.02
AC048341.2-201ENST00000550290 URB2Q14146 1524 aaKnown RBP8.65□□□□□ -1.02
AC048341.2-201ENST00000550290 CFTRP13569 1480 aa8.65□□□□□ -1.03
AC048341.2-201ENST00000550290 IFT140Q96RY7 1462 aa8.65□□□□□ -1.03
AC048341.2-201ENST00000550290 GAPVD1Q14C86 1478 aa8.64□□□□□ -1.03
AC048341.2-201ENST00000550290 CSRNP3Q8WYN3 585 aa8.64□□□□□ -1.03
AC048341.2-201ENST00000550290 KIF27Q86VH2 1401 aa8.62□□□□□ -1.03
AC048341.2-201ENST00000550290 FAM50AQ14320 339 aaKnown RBP8.6□□□□□ -1.03
AC048341.2-201ENST00000550290 CARMIL1Q5VZK9 1371 aa8.6□□□□□ -1.03
AC048341.2-201ENST00000550290 SCAF1Q9H7N4 1312 aaKnown RBP8.58□□□□□ -1.04
AC048341.2-201ENST00000550290 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
AC048341.2-201ENST00000550290 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
AC048341.2-201ENST00000550290 GRIN2BQ13224 1484 aa8.56□□□□□ -1.04
AC048341.2-201ENST00000550290 PRDM2Q13029 1718 aa8.56□□□□□ -1.04
AC048341.2-201ENST00000550290 PLEKHD1A6NEE1 506 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms