Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA3Q9Y5H8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA3Q9Y5H8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 AL137784.2-201ENST00000607332 1000 ntBASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA3Q9Y5H8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA3Q9Y5H8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 DUSP5P2-201ENST00000426873 1033 ntBASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHA3Q9Y5H8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 ZNF815P-204ENST00000434898 1737 ntBASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA3Q9Y5H8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 AC141586.3-201ENST00000562166 1838 ntBASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 AL161938.1-201ENST00000569833 2180 ntBASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA3Q9Y5H8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms