Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL390955.1-201ENST00000428694 934 ntBASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA9Q9Y5G4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHGA9Q9Y5G4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 AC006128.1-201ENST00000624704 1661 ntBASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 KRT18P57-201ENST00000443599 1254 ntBASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA9Q9Y5G4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA9Q9Y5G4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 C1QL1P1-201ENST00000568105 661 ntBASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 AL445675.2-201ENST00000620291 557 ntBASIC18.24■□□□□ 0.51
PCDHGA9Q9Y5G4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms