Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AC026271.3-201ENST00000571884 352 ntBASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 AP000525.1-201ENST00000608286 694 ntBASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 HLA-A-209ENST00000638375 975 ntBASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 AC079598.2-202ENST00000546624 1451 ntBASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 AC009237.14-201ENST00000609975 1594 ntBASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.4□□□□□ -0.27
LINC00588Q9Y4M8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 FSCN1P1-201ENST00000568912 1481 ntBASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00588Q9Y4M8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 MIR1238-201ENST00000408483 83 ntBASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 MIR6786-201ENST00000616843 113 ntBASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00588Q9Y4M8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 B3GAT3P1-201ENST00000471720 806 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms