Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 AL136967.2-201ENST00000623968 743 ntBASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 AC009237.14-201ENST00000609975 1594 ntBASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.54■□□□□ 0.56
LRCH1Q9Y2L9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCH1Q9Y2L9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRCH1Q9Y2L9 RASA4CP-201ENST00000424092 1398 ntBASIC18.52■□□□□ 0.55
LRCH1Q9Y2L9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRCH1Q9Y2L9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRCH1Q9Y2L9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LRCH1Q9Y2L9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
LRCH1Q9Y2L9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRCH1Q9Y2L9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 TNRC18P3-201ENST00000441896 2691 ntBASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 Z98044.1-201ENST00000632503 1764 ntBASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 BX842568.3-201ENST00000418104 571 ntBASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRCH1Q9Y2L9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms