Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 AP000523.1-201ENST00000398242 1049 ntBASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TFCP2L1Q9NZI6 DPP3P2-201ENST00000416030 1696 ntBASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 CR769767.2-201ENST00000622735 460 ntBASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TFCP2L1Q9NZI6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 AC004870.1-201ENST00000315132 882 ntBASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 STARP1-201ENST00000397973 869 ntBASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TFCP2L1Q9NZI6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.83■■□□□ 1.57
TFCP2L1Q9NZI6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TFCP2L1Q9NZI6 AL024507.2-201ENST00000606070 2574 ntBASIC24.83■■□□□ 1.56
TFCP2L1Q9NZI6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.83■■□□□ 1.56
TFCP2L1Q9NZI6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 KRT8P10-201ENST00000450021 1447 ntBASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 CKBP1-201ENST00000565489 1086 ntBASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 AC111152.3-201ENST00000569699 673 ntBASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TFCP2L1Q9NZI6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 AL049796.1-201ENST00000565336 1766 ntBASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 GCSHP2-201ENST00000560971 527 ntBASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 AC092329.2-201ENST00000598402 547 ntBASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 PHGDH-210ENST00000641115 1638 ntBASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TFCP2L1Q9NZI6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
TFCP2L1Q9NZI6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.8■■□□□ 1.56
TFCP2L1Q9NZI6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TFCP2L1Q9NZI6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TFCP2L1Q9NZI6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms