Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.91■□□□□ 0.62
NDE1Q9NXR1 KRT18P20-201ENST00000548986 1279 ntBASIC18.91■□□□□ 0.62
NDE1Q9NXR1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 AP000997.3-201ENST00000623333 2250 ntBASIC18.91■□□□□ 0.62
NDE1Q9NXR1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 SLC7A5P2-201ENST00000553010 536 ntBASIC18.9■□□□□ 0.62
NDE1Q9NXR1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NDE1Q9NXR1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NDE1Q9NXR1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.89■□□□□ 0.62
NDE1Q9NXR1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.89■□□□□ 0.62
NDE1Q9NXR1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.89■□□□□ 0.62
NDE1Q9NXR1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NDE1Q9NXR1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 KRT8P17-201ENST00000453110 1448 ntBASIC18.89■□□□□ 0.61
NDE1Q9NXR1 AC087633.2-202ENST00000565166 1439 ntBASIC18.89■□□□□ 0.61
NDE1Q9NXR1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NDE1Q9NXR1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 RBM17P2-201ENST00000616397 1405 ntBASIC18.88■□□□□ 0.61
NDE1Q9NXR1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDE1Q9NXR1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 RASA4CP-201ENST00000424092 1398 ntBASIC18.87■□□□□ 0.61
NDE1Q9NXR1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDE1Q9NXR1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms