Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 Z82202.1-201ENST00000623446 1880 ntBASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC40Q9H9A6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC40Q9H9A6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 AC087289.5-201ENST00000586076 3175 ntBASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC40Q9H9A6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 AIRN-201ENST00000601203 4374 ntBASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 AC008687.6-201ENST00000596318 630 ntBASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC40Q9H9A6 AP006587.1-201ENST00000534129 1502 ntBASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 AL121829.2-201ENST00000620908 328 ntBASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC40Q9H9A6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 ID1-201ENST00000376105 1233 ntBASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 YBX1P10-201ENST00000444752 975 ntBASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.8■□□□□ 0.76
LRRC40Q9H9A6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms