Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 INGX-201ENST00000359239 846 ntBASIC20.19■□□□□ 0.82
BRD9Q9H8M2 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.19■□□□□ 0.82
BRD9Q9H8M2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 RCC2P6-201ENST00000526625 1557 ntBASIC20.19■□□□□ 0.82
BRD9Q9H8M2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 PHGDH-210ENST00000641115 1638 ntBASIC20.19■□□□□ 0.82
BRD9Q9H8M2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRD9Q9H8M2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 HMGA1P5-201ENST00000412453 271 ntBASIC20.18■□□□□ 0.82
BRD9Q9H8M2 AC004951.3-201ENST00000418645 1148 ntBASIC20.18■□□□□ 0.82
BRD9Q9H8M2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BRD9Q9H8M2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 AC022616.7-201ENST00000525383 220 ntBASIC20.17■□□□□ 0.82
BRD9Q9H8M2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 AC116562.4-202ENST00000641738 218 ntBASIC20.17■□□□□ 0.82
BRD9Q9H8M2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD9Q9H8M2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD9Q9H8M2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 MFAP1P1-201ENST00000442257 1255 ntBASIC20.15■□□□□ 0.82
BRD9Q9H8M2 CCR12P-201ENST00000446203 998 ntBASIC20.15■□□□□ 0.82
BRD9Q9H8M2 FAM207BP-201ENST00000447172 505 ntBASIC20.15■□□□□ 0.82
BRD9Q9H8M2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms