Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.64■□□□□ 0.73
VPS11Q9H270 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS11Q9H270 AC008694.1-202ENST00000636953 945 ntBASIC19.64■□□□□ 0.73
VPS11Q9H270 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS11Q9H270 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.64■□□□□ 0.73
VPS11Q9H270 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS11Q9H270 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VPS11Q9H270 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VPS11Q9H270 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VPS11Q9H270 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS11Q9H270 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.63■□□□□ 0.73
VPS11Q9H270 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.63■□□□□ 0.73
VPS11Q9H270 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS11Q9H270 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS11Q9H270 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS11Q9H270 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS11Q9H270 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS11Q9H270 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 PHGDH-210ENST00000641115 1638 ntBASIC19.62■□□□□ 0.73
VPS11Q9H270 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VPS11Q9H270 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS11Q9H270 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VPS11Q9H270 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VPS11Q9H270 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS11Q9H270 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VPS11Q9H270 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.62■□□□□ 0.73
VPS11Q9H270 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS11Q9H270 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS11Q9H270 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS11Q9H270 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VPS11Q9H270 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
VPS11Q9H270 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
VPS11Q9H270 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS11Q9H270 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VPS11Q9H270 CROCCP3-202ENST00000420820 1947 ntBASIC19.61■□□□□ 0.73
VPS11Q9H270 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS11Q9H270 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS11Q9H270 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS11Q9H270 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.61■□□□□ 0.73
VPS11Q9H270 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS11Q9H270 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS11Q9H270 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS11Q9H270 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS11Q9H270 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VPS11Q9H270 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS11Q9H270 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms