Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 AC007322.4-201ENST00000509611 723 ntBASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM55Q9BYV6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 AC120498.10-201ENST00000621827 505 ntBASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM55Q9BYV6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 LINC01465-201ENST00000408887 1940 ntBASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 AC093827.2-201ENST00000512654 315 ntBASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 OR10C1-204ENST00000622521 1039 ntBASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 AL032819.2-201ENST00000624543 2162 ntBASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM55Q9BYV6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM55Q9BYV6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.64■□□□□ 0.74
TRIM55Q9BYV6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM55Q9BYV6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms