Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 HLA-G-202ENST00000376815 851 ntBASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 HLA-G-203ENST00000376818 1127 ntBASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 AL390961.4-201ENST00000623958 2535 ntBASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC9.91□□□□□ -0.82
KRTAP3-1Q9BYR8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 FP475955.4-201ENST00000623131 1990 ntBASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 MTND4LP12-201ENST00000448237 295 ntBASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 MFSD11-216ENST00000590393 1141 ntBASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 AL133373.2-201ENST00000623187 2828 ntBASIC9.9□□□□□ -0.82
KRTAP3-1Q9BYR8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 WIZP1-201ENST00000531444 2299 ntBASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-1Q9BYR8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC018470.1-201ENST00000624790 3129 ntBASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-1Q9BYR8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms