Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 GCSHP5-201ENST00000443090 522 ntBASIC16.27■□□□□ 0.2
GAFA1Q96PS6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.27■□□□□ 0.2
GAFA1Q96PS6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GAFA1Q96PS6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 AL158047.1-201ENST00000445918 881 ntBASIC16.26■□□□□ 0.19
GAFA1Q96PS6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GAFA1Q96PS6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 C1QL1P1-201ENST00000568105 661 ntBASIC16.25■□□□□ 0.19
GAFA1Q96PS6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GAFA1Q96PS6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.24■□□□□ 0.19
GAFA1Q96PS6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms