Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CALR3Q96L12 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.65■□□□□ 0.9
CALR3Q96L12 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.65■□□□□ 0.9
CALR3Q96L12 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.65■□□□□ 0.9
CALR3Q96L12 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.65■□□□□ 0.9
CALR3Q96L12 AL390719.1-204ENST00000412397 1219 ntBASIC20.65■□□□□ 0.9
CALR3Q96L12 AC093787.1-201ENST00000450396 207 ntBASIC20.65■□□□□ 0.9
CALR3Q96L12 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.65■□□□□ 0.9
CALR3Q96L12 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CALR3Q96L12 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.65■□□□□ 0.9
CALR3Q96L12 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALR3Q96L12 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.65■□□□□ 0.9
CALR3Q96L12 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
CALR3Q96L12 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.64■□□□□ 0.9
CALR3Q96L12 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CALR3Q96L12 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALR3Q96L12 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CALR3Q96L12 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALR3Q96L12 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CALR3Q96L12 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.64■□□□□ 0.9
CALR3Q96L12 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALR3Q96L12 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALR3Q96L12 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALR3Q96L12 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.64■□□□□ 0.89
CALR3Q96L12 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CALR3Q96L12 AC026271.2-201ENST00000428091 497 ntBASIC20.64■□□□□ 0.89
CALR3Q96L12 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.64■□□□□ 0.89
CALR3Q96L12 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 AL138781.2-201ENST00000617896 1843 ntBASIC20.64■□□□□ 0.89
CALR3Q96L12 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CALR3Q96L12 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALR3Q96L12 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.63■□□□□ 0.89
CALR3Q96L12 LETM1P2-201ENST00000597330 2178 ntBASIC20.63■□□□□ 0.89
CALR3Q96L12 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CALR3Q96L12 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.63■□□□□ 0.89
CALR3Q96L12 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.63■□□□□ 0.89
CALR3Q96L12 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.63■□□□□ 0.89
CALR3Q96L12 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.63■□□□□ 0.89
CALR3Q96L12 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CALR3Q96L12 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.63■□□□□ 0.89
CALR3Q96L12 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.63■□□□□ 0.89
CALR3Q96L12 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.63■□□□□ 0.89
CALR3Q96L12 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.63■□□□□ 0.89
CALR3Q96L12 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.63■□□□□ 0.89
CALR3Q96L12 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.63■□□□□ 0.89
CALR3Q96L12 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.63■□□□□ 0.89
CALR3Q96L12 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALR3Q96L12 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.62■□□□□ 0.89
CALR3Q96L12 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.62■□□□□ 0.89
CALR3Q96L12 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.62■□□□□ 0.89
CALR3Q96L12 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.62■□□□□ 0.89
CALR3Q96L12 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CALR3Q96L12 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.62■□□□□ 0.89
CALR3Q96L12 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALR3Q96L12 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.62■□□□□ 0.89
CALR3Q96L12 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALR3Q96L12 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CALR3Q96L12 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.61■□□□□ 0.89
CALR3Q96L12 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALR3Q96L12 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.61■□□□□ 0.89
CALR3Q96L12 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.61■□□□□ 0.89
CALR3Q96L12 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALR3Q96L12 AC005829.2-201ENST00000571422 1056 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms