Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPGRIP1Q96KN7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 AP000974.1-201ENST00000623909 2387 ntBASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 ARMC10P1-201ENST00000313754 855 ntBASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 AC110285.5-201ENST00000611501 352 ntBASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 AL158211.5-201ENST00000623583 2518 ntBASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RPGRIP1Q96KN7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 KRASP1-201ENST00000407852 552 ntBASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 KRT18P35-201ENST00000510488 1269 ntBASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 CYP21A1P-202ENST00000354927 1481 ntBASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPGRIP1Q96KN7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 PRKY-204ENST00000533551 1019 ntBASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 AC105020.6-201ENST00000621523 1217 ntBASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.48■■□□□ 1.03
RPGRIP1Q96KN7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 RN7SL850P-201ENST00000579959 291 ntBASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPGRIP1Q96KN7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRIP1Q96KN7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.46■■□□□ 1.03
RPGRIP1Q96KN7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.46■■□□□ 1.03
RPGRIP1Q96KN7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.46■■□□□ 1.03
RPGRIP1Q96KN7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRIP1Q96KN7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRIP1Q96KN7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPGRIP1Q96KN7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms