Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
APH1AQ96BI3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.33■□□□□ 0.37
APH1AQ96BI3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
APH1AQ96BI3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
APH1AQ96BI3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.33■□□□□ 0.37
APH1AQ96BI3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 HTR7P1-201ENST00000538670 1336 ntBASIC17.33■□□□□ 0.36
APH1AQ96BI3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 AL353807.1-201ENST00000427475 662 ntBASIC17.33■□□□□ 0.36
APH1AQ96BI3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 AC093827.2-201ENST00000512654 315 ntBASIC17.33■□□□□ 0.36
APH1AQ96BI3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.33■□□□□ 0.36
APH1AQ96BI3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.33■□□□□ 0.36
APH1AQ96BI3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APH1AQ96BI3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 AP001412.1-201ENST00000608405 714 ntBASIC17.32■□□□□ 0.36
APH1AQ96BI3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APH1AQ96BI3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.32■□□□□ 0.36
APH1AQ96BI3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 AC012618.2-201ENST00000428058 849 ntBASIC17.31■□□□□ 0.36
APH1AQ96BI3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 RPS2P4-201ENST00000476944 856 ntBASIC17.31■□□□□ 0.36
APH1AQ96BI3 AP002982.1-201ENST00000492365 877 ntBASIC17.31■□□□□ 0.36
APH1AQ96BI3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APH1AQ96BI3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.31■□□□□ 0.36
APH1AQ96BI3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.3■□□□□ 0.36
APH1AQ96BI3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APH1AQ96BI3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 C1QL1P1-201ENST00000568105 661 ntBASIC17.3■□□□□ 0.36
APH1AQ96BI3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.3■□□□□ 0.36
APH1AQ96BI3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms