Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 PCDHA12-202ENST00000613593 2588 ntBASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 AC009237.3-201ENST00000393279 1427 ntBASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00173Q6ZV60 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LINC00173Q6ZV60 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.15□□□□□ -0.15
LINC00173Q6ZV60 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 AC011298.3-201ENST00000615796 283 ntBASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 AL031598.1-201ENST00000561511 1773 ntBASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 AC124067.4-201ENST00000519691 2379 ntBASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00173Q6ZV60 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 RARRES2P1-201ENST00000474487 481 ntBASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00173Q6ZV60 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 AL139384.1-201ENST00000612143 3047 ntBASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms