Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 SMG8-203ENST00000578922 2178 ntBASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR3Q6P9H4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.09■□□□□ 0.97
CNKSR3Q6P9H4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 KRT18P38-201ENST00000449496 1282 ntBASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
CNKSR3Q6P9H4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNKSR3Q6P9H4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNKSR3Q6P9H4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNKSR3Q6P9H4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNKSR3Q6P9H4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.08■□□□□ 0.96
CNKSR3Q6P9H4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CNKSR3Q6P9H4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 BX119927.1-201ENST00000636596 1552 ntBASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 AL450487.1-201ENST00000426799 995 ntBASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 HCG4P8-203ENST00000443049 980 ntBASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 AC079834.2-201ENST00000609776 1949 ntBASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR3Q6P9H4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 AP001271.2-201ENST00000624018 1556 ntBASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 AP000523.1-201ENST00000398242 1049 ntBASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 AC069148.1-201ENST00000608741 768 ntBASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR3Q6P9H4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms