Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 AC026366.1-201ENST00000488803 879 ntBASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF9Q5VWM5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF9Q5VWM5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 YBX1P10-201ENST00000444752 975 ntBASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRAMEF9Q5VWM5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF9Q5VWM5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms