Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.28■□□□□ 0.68
SRP54P61011 AC079598.2-202ENST00000546624 1451 ntBASIC19.28■□□□□ 0.68
SRP54P61011 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
SRP54P61011 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
SRP54P61011 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 AP001271.2-201ENST00000624018 1556 ntBASIC19.27■□□□□ 0.68
SRP54P61011 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 AL512408.1-201ENST00000569378 2000 ntBASIC19.27■□□□□ 0.68
SRP54P61011 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.27■□□□□ 0.68
SRP54P61011 FEM1AP1-201ENST00000431297 1995 ntBASIC19.27■□□□□ 0.68
SRP54P61011 TMEM179-206ENST00000616017 1645 ntBASIC19.27■□□□□ 0.68
SRP54P61011 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.27■□□□□ 0.68
SRP54P61011 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.27■□□□□ 0.68
SRP54P61011 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.27■□□□□ 0.68
SRP54P61011 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 AP000525.1-201ENST00000608286 694 ntBASIC19.27■□□□□ 0.68
SRP54P61011 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.27■□□□□ 0.68
SRP54P61011 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRP54P61011 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.27■□□□□ 0.68
SRP54P61011 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRP54P61011 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.27■□□□□ 0.67
SRP54P61011 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.27■□□□□ 0.67
SRP54P61011 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SRP54P61011 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRP54P61011 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRP54P61011 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRP54P61011 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRP54P61011 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SRP54P61011 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.26■□□□□ 0.67
SRP54P61011 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SRP54P61011 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SRP54P61011 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SRP54P61011 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.26■□□□□ 0.67
SRP54P61011 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.26■□□□□ 0.67
SRP54P61011 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.26■□□□□ 0.67
SRP54P61011 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
SRP54P61011 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.26■□□□□ 0.67
SRP54P61011 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP54P61011 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.25■□□□□ 0.67
SRP54P61011 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.25■□□□□ 0.67
SRP54P61011 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SRP54P61011 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.25■□□□□ 0.67
SRP54P61011 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SRP54P61011 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.25■□□□□ 0.67
SRP54P61011 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.25■□□□□ 0.67
SRP54P61011 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SRP54P61011 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.25■□□□□ 0.67
SRP54P61011 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.25■□□□□ 0.67
SRP54P61011 AC097493.4-201ENST00000641197 219 ntBASIC19.25■□□□□ 0.67
SRP54P61011 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.25■□□□□ 0.67
SRP54P61011 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SRP54P61011 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP54P61011 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
SRP54P61011 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SRP54P61011 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.25■□□□□ 0.67
SRP54P61011 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SRP54P61011 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SRP54P61011 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.24■□□□□ 0.67
SRP54P61011 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
SRP54P61011 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.24■□□□□ 0.67
SRP54P61011 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.24■□□□□ 0.67
SRP54P61011 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRP54P61011 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.24■□□□□ 0.67
SRP54P61011 MIR1238-201ENST00000408483 83 ntBASIC19.24■□□□□ 0.67
SRP54P61011 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.24■□□□□ 0.67
SRP54P61011 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.24■□□□□ 0.67
SRP54P61011 AC026271.3-201ENST00000571884 352 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms