Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2JP52435 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
POLR2JP52435 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR2JP52435 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR2JP52435 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR2JP52435 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2JP52435 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2JP52435 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 AL138781.2-201ENST00000617896 1843 ntBASIC18.68■□□□□ 0.58
POLR2JP52435 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
POLR2JP52435 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2JP52435 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.68■□□□□ 0.58
POLR2JP52435 KRT18P5-201ENST00000436075 1291 ntBASIC18.68■□□□□ 0.58
POLR2JP52435 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.68■□□□□ 0.58
POLR2JP52435 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR2JP52435 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2JP52435 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2JP52435 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR2JP52435 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2JP52435 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
POLR2JP52435 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
POLR2JP52435 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
POLR2JP52435 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 OR10C1-204ENST00000622521 1039 ntBASIC18.67■□□□□ 0.58
POLR2JP52435 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
POLR2JP52435 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR2JP52435 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2JP52435 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLR2JP52435 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR2JP52435 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR2JP52435 KRT17P1-201ENST00000399211 1546 ntBASIC18.66■□□□□ 0.58
POLR2JP52435 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.66■□□□□ 0.58
POLR2JP52435 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 AC231657.2-201ENST00000624556 255 ntBASIC18.66■□□□□ 0.58
POLR2JP52435 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR2JP52435 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
POLR2JP52435 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 AL161938.1-201ENST00000569833 2180 ntBASIC18.66■□□□□ 0.58
POLR2JP52435 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 NEFHP1-201ENST00000412845 2629 ntBASIC18.66■□□□□ 0.58
POLR2JP52435 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR2JP52435 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2JP52435 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR2JP52435 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2JP52435 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR2JP52435 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
POLR2JP52435 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2JP52435 AC116351.2-201ENST00000606540 1585 ntBASIC18.65■□□□□ 0.58
POLR2JP52435 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms