Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PCP4P48539 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.56□□□□□ -0.24
PCP4P48539 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PCP4P48539 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PCP4P48539 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.55□□□□□ -0.24
PCP4P48539 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PCP4P48539 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC13.55□□□□□ -0.24
PCP4P48539 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
PCP4P48539 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PCP4P48539 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PCP4P48539 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
PCP4P48539 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCP4P48539 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.55□□□□□ -0.24
PCP4P48539 AL354751.1-201ENST00000412768 1863 ntBASIC13.55□□□□□ -0.24
PCP4P48539 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.55□□□□□ -0.24
PCP4P48539 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 AC020907.5-201ENST00000624372 1936 ntBASIC13.54□□□□□ -0.24
PCP4P48539 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 AC068587.6-202ENST00000641839 5619 ntBASIC13.54□□□□□ -0.24
PCP4P48539 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.54□□□□□ -0.24
PCP4P48539 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.54□□□□□ -0.24
PCP4P48539 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PCP4P48539 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.54□□□□□ -0.24
PCP4P48539 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.54□□□□□ -0.24
PCP4P48539 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCP4P48539 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.54□□□□□ -0.24
PCP4P48539 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.54□□□□□ -0.24
PCP4P48539 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
PCP4P48539 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCP4P48539 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCP4P48539 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCP4P48539 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms