Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 MIR4497-201ENST00000583208 89 ntBASIC17.52■□□□□ 0.4
PPP3CBP16298 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PPP3CBP16298 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP3CBP16298 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP3CBP16298 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PPP3CBP16298 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PPP3CBP16298 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.52■□□□□ 0.39
PPP3CBP16298 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 AC026471.1-201ENST00000564629 3026 ntBASIC17.51■□□□□ 0.39
PPP3CBP16298 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP3CBP16298 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PPP3CBP16298 KRASP1-201ENST00000407852 552 ntBASIC17.51■□□□□ 0.39
PPP3CBP16298 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP3CBP16298 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PPP3CBP16298 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 AL121906.2-201ENST00000621597 723 ntBASIC17.51■□□□□ 0.39
PPP3CBP16298 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PPP3CBP16298 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP3CBP16298 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP3CBP16298 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP3CBP16298 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP3CBP16298 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.5■□□□□ 0.39
PPP3CBP16298 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PPP3CBP16298 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PPP3CBP16298 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.5■□□□□ 0.39
PPP3CBP16298 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.5■□□□□ 0.39
PPP3CBP16298 AC233702.5-201ENST00000584107 538 ntBASIC17.5■□□□□ 0.39
PPP3CBP16298 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PPP3CBP16298 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.5■□□□□ 0.39
PPP3CBP16298 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PPP3CBP16298 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP3CBP16298 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PPP3CBP16298 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.5■□□□□ 0.39
PPP3CBP16298 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 LETM1P2-201ENST00000597330 2178 ntBASIC17.49■□□□□ 0.39
PPP3CBP16298 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.49■□□□□ 0.39
PPP3CBP16298 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PPP3CBP16298 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.49■□□□□ 0.39
PPP3CBP16298 RARRES2P10-201ENST00000564312 460 ntBASIC17.49■□□□□ 0.39
PPP3CBP16298 Z99916.2-201ENST00000604037 246 ntBASIC17.49■□□□□ 0.39
PPP3CBP16298 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.49■□□□□ 0.39
PPP3CBP16298 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.49■□□□□ 0.39
PPP3CBP16298 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.49■□□□□ 0.39
PPP3CBP16298 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PPP3CBP16298 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PPP3CBP16298 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.49■□□□□ 0.39
PPP3CBP16298 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PPP3CBP16298 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PPP3CBP16298 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PPP3CBP16298 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.48■□□□□ 0.39
PPP3CBP16298 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms