Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.84■□□□□ 0.93
FAM228BP0C875 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 AC124283.5-201ENST00000624661 1809 ntBASIC20.84■□□□□ 0.93
FAM228BP0C875 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.84■□□□□ 0.93
FAM228BP0C875 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.84■□□□□ 0.93
FAM228BP0C875 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM228BP0C875 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FAM228BP0C875 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
FAM228BP0C875 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM228BP0C875 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FAM228BP0C875 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM228BP0C875 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM228BP0C875 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FAM228BP0C875 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.83■□□□□ 0.93
FAM228BP0C875 AL390719.1-204ENST00000412397 1219 ntBASIC20.83■□□□□ 0.93
FAM228BP0C875 DUSP5P2-201ENST00000426873 1033 ntBASIC20.83■□□□□ 0.93
FAM228BP0C875 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM228BP0C875 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.83■□□□□ 0.93
FAM228BP0C875 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FAM228BP0C875 AL161938.1-201ENST00000569833 2180 ntBASIC20.83■□□□□ 0.92
FAM228BP0C875 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
FAM228BP0C875 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
FAM228BP0C875 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FAM228BP0C875 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
FAM228BP0C875 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.83■□□□□ 0.92
FAM228BP0C875 AL049812.1-201ENST00000432563 2267 ntBASIC20.83■□□□□ 0.92
FAM228BP0C875 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
FAM228BP0C875 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.82■□□□□ 0.92
FAM228BP0C875 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.82■□□□□ 0.92
FAM228BP0C875 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.82■□□□□ 0.92
FAM228BP0C875 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.82■□□□□ 0.92
FAM228BP0C875 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.82■□□□□ 0.92
FAM228BP0C875 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.82■□□□□ 0.92
FAM228BP0C875 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 AC083906.2-201ENST00000511578 360 ntBASIC20.82■□□□□ 0.92
FAM228BP0C875 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
FAM228BP0C875 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 TEX21P-204ENST00000641479 1693 ntBASIC20.82■□□□□ 0.92
FAM228BP0C875 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
FAM228BP0C875 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
FAM228BP0C875 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM228BP0C875 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.81■□□□□ 0.92
FAM228BP0C875 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
FAM228BP0C875 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.81■□□□□ 0.92
FAM228BP0C875 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
FAM228BP0C875 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
FAM228BP0C875 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.81■□□□□ 0.92
FAM228BP0C875 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
FAM228BP0C875 AC006557.6-201ENST00000623071 864 ntBASIC20.81■□□□□ 0.92
FAM228BP0C875 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.81■□□□□ 0.92
FAM228BP0C875 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM228BP0C875 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.8■□□□□ 0.92
FAM228BP0C875 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FAM228BP0C875 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM228BP0C875 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM228BP0C875 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM228BP0C875 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM228BP0C875 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
FAM228BP0C875 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
FAM228BP0C875 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.8■□□□□ 0.92
FAM228BP0C875 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.8■□□□□ 0.92
FAM228BP0C875 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.8■□□□□ 0.92
FAM228BP0C875 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.8■□□□□ 0.92
FAM228BP0C875 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms