Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.87□□□□□ -0.03
TCRAP04437 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TCRAP04437 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRAP04437 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
TCRAP04437 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.87□□□□□ -0.03
TCRAP04437 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.87□□□□□ -0.03
TCRAP04437 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRAP04437 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 UBE2DNL-204ENST00000602536 740 ntBASIC14.87□□□□□ -0.03
TCRAP04437 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 AC007613.1-201ENST00000572811 2597 ntBASIC14.87□□□□□ -0.03
TCRAP04437 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TCRAP04437 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRAP04437 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TCRAP04437 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TCRAP04437 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
TCRAP04437 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TCRAP04437 LETM1P2-201ENST00000597330 2178 ntBASIC14.87□□□□□ -0.03
TCRAP04437 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRAP04437 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TCRAP04437 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TCRAP04437 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRAP04437 KRT19P1-201ENST00000405746 1186 ntBASIC14.86□□□□□ -0.03
TCRAP04437 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRAP04437 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.86□□□□□ -0.03
TCRAP04437 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.86□□□□□ -0.03
TCRAP04437 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.86□□□□□ -0.03
TCRAP04437 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.86□□□□□ -0.03
TCRAP04437 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TCRAP04437 MYCNOS-205ENST00000641950 531 ntBASIC14.86□□□□□ -0.03
TCRAP04437 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRAP04437 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TCRAP04437 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TCRAP04437 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRAP04437 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRAP04437 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TCRAP04437 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TCRAP04437 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRAP04437 AC079598.2-202ENST00000546624 1451 ntBASIC14.85□□□□□ -0.03
TCRAP04437 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 AL162412.1-201ENST00000567129 965 ntBASIC14.85□□□□□ -0.03
TCRAP04437 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.85□□□□□ -0.03
TCRAP04437 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRAP04437 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TCRAP04437 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRAP04437 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TCRAP04437 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms