Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCATP04180 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.09■□□□□ 0.33
LCATP04180 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCATP04180 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
LCATP04180 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LCATP04180 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.08■□□□□ 0.33
LCATP04180 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LCATP04180 AC124283.5-201ENST00000624661 1809 ntBASIC17.08■□□□□ 0.33
LCATP04180 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.08■□□□□ 0.32
LCATP04180 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.08■□□□□ 0.32
LCATP04180 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.08■□□□□ 0.32
LCATP04180 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LCATP04180 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCATP04180 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.08■□□□□ 0.32
LCATP04180 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LCATP04180 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCATP04180 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LCATP04180 ID1-201ENST00000376105 1233 ntBASIC17.08■□□□□ 0.32
LCATP04180 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.08■□□□□ 0.32
LCATP04180 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.08■□□□□ 0.32
LCATP04180 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.08■□□□□ 0.32
LCATP04180 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.08■□□□□ 0.32
LCATP04180 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.08■□□□□ 0.32
LCATP04180 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.08■□□□□ 0.32
LCATP04180 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCATP04180 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCATP04180 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LCATP04180 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LCATP04180 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.07■□□□□ 0.32
LCATP04180 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.07■□□□□ 0.32
LCATP04180 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LCATP04180 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LCATP04180 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.07■□□□□ 0.32
LCATP04180 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.07■□□□□ 0.32
LCATP04180 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.07■□□□□ 0.32
LCATP04180 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.07■□□□□ 0.32
LCATP04180 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.07■□□□□ 0.32
LCATP04180 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
LCATP04180 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.07■□□□□ 0.32
LCATP04180 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LCATP04180 AC116562.4-201ENST00000641316 2276 ntBASIC17.07■□□□□ 0.32
LCATP04180 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.06■□□□□ 0.32
LCATP04180 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.06■□□□□ 0.32
LCATP04180 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LCATP04180 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.06■□□□□ 0.32
LCATP04180 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LCATP04180 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.06■□□□□ 0.32
LCATP04180 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.06■□□□□ 0.32
LCATP04180 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 SOX15-203ENST00000570788 1093 ntBASIC17.06■□□□□ 0.32
LCATP04180 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.06■□□□□ 0.32
LCATP04180 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LCATP04180 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
LCATP04180 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.06■□□□□ 0.32
LCATP04180 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
LCATP04180 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 TFP1-202ENST00000475455 1573 ntBASIC17.06■□□□□ 0.32
LCATP04180 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LCATP04180 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.05■□□□□ 0.32
LCATP04180 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LCATP04180 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.05■□□□□ 0.32
LCATP04180 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LCATP04180 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.05■□□□□ 0.32
LCATP04180 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.05■□□□□ 0.32
LCATP04180 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.05■□□□□ 0.32
LCATP04180 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.05■□□□□ 0.32
LCATP04180 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.05■□□□□ 0.32
LCATP04180 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.05■□□□□ 0.32
LCATP04180 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCATP04180 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms