Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
APOC1P02654 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.25■□□□□ 0.35
APOC1P02654 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.25■□□□□ 0.35
APOC1P02654 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 MIR663A-201ENST00000385250 93 ntBASIC17.25■□□□□ 0.35
APOC1P02654 GPX1P1-201ENST00000388829 606 ntBASIC17.25■□□□□ 0.35
APOC1P02654 MIR935-201ENST00000401179 91 ntBASIC17.25■□□□□ 0.35
APOC1P02654 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
APOC1P02654 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.25■□□□□ 0.35
APOC1P02654 IKBKGP1-201ENST00000612193 1073 ntBASIC17.25■□□□□ 0.35
APOC1P02654 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.25■□□□□ 0.35
APOC1P02654 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.25■□□□□ 0.35
APOC1P02654 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
APOC1P02654 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.25■□□□□ 0.35
APOC1P02654 AC125437.2-201ENST00000625180 2167 ntBASIC17.25■□□□□ 0.35
APOC1P02654 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
APOC1P02654 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
APOC1P02654 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.24■□□□□ 0.35
APOC1P02654 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
APOC1P02654 AC006970.2-201ENST00000450065 779 ntBASIC17.24■□□□□ 0.35
APOC1P02654 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.24■□□□□ 0.35
APOC1P02654 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
APOC1P02654 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.24■□□□□ 0.35
APOC1P02654 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.24■□□□□ 0.35
APOC1P02654 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.24■□□□□ 0.35
APOC1P02654 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.24■□□□□ 0.35
APOC1P02654 AL121832.2-201ENST00000610979 668 ntBASIC17.24■□□□□ 0.35
APOC1P02654 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOC1P02654 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APOC1P02654 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOC1P02654 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 AC073210.2-201ENST00000430369 194 ntBASIC17.23■□□□□ 0.35
APOC1P02654 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.23■□□□□ 0.35
APOC1P02654 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.23■□□□□ 0.35
APOC1P02654 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.23■□□□□ 0.35
APOC1P02654 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.23■□□□□ 0.35
APOC1P02654 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APOC1P02654 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
APOC1P02654 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
APOC1P02654 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
APOC1P02654 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
APOC1P02654 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
APOC1P02654 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
APOC1P02654 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.22■□□□□ 0.35
APOC1P02654 SLC29A4P1-201ENST00000398760 971 ntBASIC17.22■□□□□ 0.35
APOC1P02654 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.22■□□□□ 0.35
APOC1P02654 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.22■□□□□ 0.35
APOC1P02654 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.22■□□□□ 0.35
APOC1P02654 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms