Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
MT-CO1P00395 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
MT-CO1P00395 HTR7P1-201ENST00000538670 1336 ntBASIC20.03■□□□□ 0.8
MT-CO1P00395 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO1P00395 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO1P00395 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO1P00395 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-CO1P00395 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO1P00395 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO1P00395 AC012618.2-201ENST00000428058 849 ntBASIC20.03■□□□□ 0.8
MT-CO1P00395 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-CO1P00395 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-CO1P00395 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-CO1P00395 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.03■□□□□ 0.8
MT-CO1P00395 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO1P00395 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.03■□□□□ 0.8
MT-CO1P00395 AC004264.1-201ENST00000608354 794 ntBASIC20.03■□□□□ 0.8
MT-CO1P00395 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MT-CO1P00395 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.03■□□□□ 0.8
MT-CO1P00395 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO1P00395 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
MT-CO1P00395 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-CO1P00395 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO1P00395 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO1P00395 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.02■□□□□ 0.8
MT-CO1P00395 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.02■□□□□ 0.8
MT-CO1P00395 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.02■□□□□ 0.8
MT-CO1P00395 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO1P00395 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MT-CO1P00395 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MT-CO1P00395 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
MT-CO1P00395 SNORA78-201ENST00000459373 127 ntBASIC20.02■□□□□ 0.8
MT-CO1P00395 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.02■□□□□ 0.8
MT-CO1P00395 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.02■□□□□ 0.8
MT-CO1P00395 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.02■□□□□ 0.8
MT-CO1P00395 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
MT-CO1P00395 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO1P00395 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.02■□□□□ 0.8
MT-CO1P00395 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO1P00395 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO1P00395 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO1P00395 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
MT-CO1P00395 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MT-CO1P00395 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MT-CO1P00395 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MT-CO1P00395 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
MT-CO1P00395 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.02■□□□□ 0.79
MT-CO1P00395 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
MT-CO1P00395 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.02■□□□□ 0.79
MT-CO1P00395 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.01■□□□□ 0.79
MT-CO1P00395 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MT-CO1P00395 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.01■□□□□ 0.79
MT-CO1P00395 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.01■□□□□ 0.79
MT-CO1P00395 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO1P00395 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO1P00395 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
MT-CO1P00395 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.01■□□□□ 0.79
MT-CO1P00395 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO1P00395 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO1P00395 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.01■□□□□ 0.79
MT-CO1P00395 AL049637.2-201ENST00000641778 930 ntBASIC20.01■□□□□ 0.79
MT-CO1P00395 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO1P00395 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MT-CO1P00395 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
MT-CO1P00395 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO1P00395 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.01■□□□□ 0.79
MT-CO1P00395 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20■□□□□ 0.79
MT-CO1P00395 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MT-CO1P00395 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20■□□□□ 0.79
MT-CO1P00395 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
MT-CO1P00395 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20■□□□□ 0.79
MT-CO1P00395 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
MT-CO1P00395 MIR4497-201ENST00000583208 89 ntBASIC20■□□□□ 0.79
MT-CO1P00395 AF186192.3-201ENST00000583427 947 ntBASIC20■□□□□ 0.79
MT-CO1P00395 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20■□□□□ 0.79
MT-CO1P00395 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20■□□□□ 0.79
MT-CO1P00395 AC113410.3-201ENST00000623366 203 ntBASIC20■□□□□ 0.79
MT-CO1P00395 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 AL135905.2-201ENST00000584934 1404 ntBASIC20■□□□□ 0.79
MT-CO1P00395 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO1P00395 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
MT-CO1P00395 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MT-CO1P00395 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-CO1P00395 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MT-CO1P00395 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms