Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC124283.5-201ENST00000624661 1809 ntBASIC18.41■□□□□ 0.54
PLOD3O60568 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.41■□□□□ 0.54
PLOD3O60568 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.41■□□□□ 0.54
PLOD3O60568 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PLOD3O60568 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PLOD3O60568 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.4■□□□□ 0.54
PLOD3O60568 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PLOD3O60568 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.4■□□□□ 0.54
PLOD3O60568 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.4■□□□□ 0.54
PLOD3O60568 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PLOD3O60568 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.4■□□□□ 0.54
PLOD3O60568 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PLOD3O60568 KRT18P6-201ENST00000555540 1265 ntBASIC18.4■□□□□ 0.54
PLOD3O60568 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 AL121906.2-201ENST00000621597 723 ntBASIC18.4■□□□□ 0.54
PLOD3O60568 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.4■□□□□ 0.54
PLOD3O60568 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.4■□□□□ 0.54
PLOD3O60568 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PLOD3O60568 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.4■□□□□ 0.54
PLOD3O60568 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PLOD3O60568 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PLOD3O60568 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PLOD3O60568 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PLOD3O60568 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PLOD3O60568 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.39■□□□□ 0.53
PLOD3O60568 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PLOD3O60568 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PLOD3O60568 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PLOD3O60568 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 TREX1-205ENST00000625293 1783 ntBASIC18.38■□□□□ 0.53
PLOD3O60568 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PLOD3O60568 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
PLOD3O60568 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 RNA5SP413-201ENST00000516373 109 ntBASIC18.38■□□□□ 0.53
PLOD3O60568 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.38■□□□□ 0.53
PLOD3O60568 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
PLOD3O60568 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.38■□□□□ 0.53
PLOD3O60568 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.38■□□□□ 0.53
PLOD3O60568 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.38■□□□□ 0.53
PLOD3O60568 AL121829.2-201ENST00000620908 328 ntBASIC18.38■□□□□ 0.53
PLOD3O60568 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.38■□□□□ 0.53
PLOD3O60568 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.38■□□□□ 0.53
PLOD3O60568 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.38■□□□□ 0.53
PLOD3O60568 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PLOD3O60568 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PLOD3O60568 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.38■□□□□ 0.53
PLOD3O60568 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PLOD3O60568 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.37■□□□□ 0.53
PLOD3O60568 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms