Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PEX1O43933 AC007613.1-201ENST00000572811 2597 ntBASIC18.99■□□□□ 0.63
PEX1O43933 AC020916.1-201ENST00000587762 1774 ntBASIC18.99■□□□□ 0.63
PEX1O43933 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX1O43933 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PEX1O43933 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.99■□□□□ 0.63
PEX1O43933 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PEX1O43933 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX1O43933 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX1O43933 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PEX1O43933 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PEX1O43933 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PEX1O43933 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PEX1O43933 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PEX1O43933 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PEX1O43933 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 AC010980.2-201ENST00000587099 1412 ntBASIC18.99■□□□□ 0.63
PEX1O43933 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PEX1O43933 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX1O43933 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.99■□□□□ 0.63
PEX1O43933 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PEX1O43933 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.98■□□□□ 0.63
PEX1O43933 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PEX1O43933 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.98■□□□□ 0.63
PEX1O43933 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.98■□□□□ 0.63
PEX1O43933 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PEX1O43933 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.98■□□□□ 0.63
PEX1O43933 CDV3P1-201ENST00000471403 739 ntBASIC18.98■□□□□ 0.63
PEX1O43933 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 AC092118.2-201ENST00000613495 667 ntBASIC18.98■□□□□ 0.63
PEX1O43933 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PEX1O43933 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PEX1O43933 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.98■□□□□ 0.63
PEX1O43933 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.98■□□□□ 0.63
PEX1O43933 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX1O43933 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
PEX1O43933 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PEX1O43933 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.97■□□□□ 0.63
PEX1O43933 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.97■□□□□ 0.63
PEX1O43933 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.97■□□□□ 0.63
PEX1O43933 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PEX1O43933 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.97■□□□□ 0.63
PEX1O43933 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.97■□□□□ 0.63
PEX1O43933 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.97■□□□□ 0.63
PEX1O43933 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEX1O43933 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.97■□□□□ 0.63
PEX1O43933 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX1O43933 AL691432.2-201ENST00000607222 2038 ntBASIC18.96■□□□□ 0.63
PEX1O43933 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX1O43933 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PEX1O43933 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PEX1O43933 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PEX1O43933 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PEX1O43933 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.96■□□□□ 0.63
PEX1O43933 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.96■□□□□ 0.63
PEX1O43933 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.96■□□□□ 0.63
PEX1O43933 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.96■□□□□ 0.63
PEX1O43933 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.96■□□□□ 0.63
PEX1O43933 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEX1O43933 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.96■□□□□ 0.63
PEX1O43933 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms