Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
VEGFDO43915 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VEGFDO43915 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VEGFDO43915 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.22■□□□□ 0.67
VEGFDO43915 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
VEGFDO43915 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.21■□□□□ 0.67
VEGFDO43915 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.21■□□□□ 0.67
VEGFDO43915 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.21■□□□□ 0.67
VEGFDO43915 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.21■□□□□ 0.67
VEGFDO43915 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.21■□□□□ 0.67
VEGFDO43915 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.21■□□□□ 0.67
VEGFDO43915 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.21■□□□□ 0.67
VEGFDO43915 MIR4497-201ENST00000583208 89 ntBASIC19.21■□□□□ 0.67
VEGFDO43915 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.21■□□□□ 0.67
VEGFDO43915 CD177P1-201ENST00000606252 935 ntBASIC19.21■□□□□ 0.67
VEGFDO43915 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.21■□□□□ 0.67
VEGFDO43915 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VEGFDO43915 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VEGFDO43915 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
VEGFDO43915 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.2■□□□□ 0.66
VEGFDO43915 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VEGFDO43915 KRT16P1-201ENST00000399124 1418 ntBASIC19.2■□□□□ 0.66
VEGFDO43915 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VEGFDO43915 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VEGFDO43915 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.2■□□□□ 0.66
VEGFDO43915 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.2■□□□□ 0.66
VEGFDO43915 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.2■□□□□ 0.66
VEGFDO43915 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
VEGFDO43915 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.2■□□□□ 0.66
VEGFDO43915 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VEGFDO43915 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
VEGFDO43915 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VEGFDO43915 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VEGFDO43915 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VEGFDO43915 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.2■□□□□ 0.66
VEGFDO43915 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
VEGFDO43915 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.19■□□□□ 0.66
VEGFDO43915 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VEGFDO43915 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VEGFDO43915 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.19■□□□□ 0.66
VEGFDO43915 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VEGFDO43915 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.19■□□□□ 0.66
VEGFDO43915 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.19■□□□□ 0.66
VEGFDO43915 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.19■□□□□ 0.66
VEGFDO43915 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.19■□□□□ 0.66
VEGFDO43915 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.19■□□□□ 0.66
VEGFDO43915 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.19■□□□□ 0.66
VEGFDO43915 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VEGFDO43915 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VEGFDO43915 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VEGFDO43915 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.19■□□□□ 0.66
VEGFDO43915 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VEGFDO43915 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.19■□□□□ 0.66
VEGFDO43915 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.19■□□□□ 0.66
VEGFDO43915 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VEGFDO43915 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VEGFDO43915 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VEGFDO43915 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.19■□□□□ 0.66
VEGFDO43915 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.18■□□□□ 0.66
VEGFDO43915 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.18■□□□□ 0.66
VEGFDO43915 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 FAM197Y1-201ENST00000421178 764 ntBASIC19.18■□□□□ 0.66
VEGFDO43915 AL596275.1-201ENST00000423464 877 ntBASIC19.18■□□□□ 0.66
VEGFDO43915 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.18■□□□□ 0.66
VEGFDO43915 SNORA78-201ENST00000459373 127 ntBASIC19.18■□□□□ 0.66
VEGFDO43915 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.18■□□□□ 0.66
VEGFDO43915 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms