Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 AC131212.1-201ENST00000613771 668 ntBASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV18A0A075B6X5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 LINC02228-203ENST00000641970 1355 ntBASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 AC104581.1-202ENST00000635932 2618 ntBASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV18A0A075B6X5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 AL031963.3-201ENST00000606441 850 ntBASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 AC110285.6-201ENST00000617652 491 ntBASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 CYP21A1P-202ENST00000354927 1481 ntBASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 KRT8P20-201ENST00000423953 1409 ntBASIC16.79■□□□□ 0.28
TRAV18A0A075B6X5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms