Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MIR4325-201ENST00000583049 90 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC069542.2-201ENST00000624816 216 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 MIR3653-201ENST00000625572 110 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 THAP12P9-201ENST00000503971 2360 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AL831737.1-201ENST00000441288 271 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AL162151.2-201ENST00000448875 158 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC109464.1-201ENST00000511091 819 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 DYNLL1P4-201ENST00000549314 266 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC006504.3-201ENST00000586818 523 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 RPS5P7-201ENST00000456664 608 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC020779.1-201ENST00000478757 796 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 TRMT10BP1-201ENST00000519377 943 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC009027.1-201ENST00000604510 479 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC026367.2-201ENST00000610630 553 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC006065.6-201ENST00000625201 545 ntBASIC2.01□□□□□ -2.09
MACF1Q9UPN3 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
MACF1Q9UPN3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 RNU1-83P-201ENST00000363426 164 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 MIR128-1-201ENST00000384921 82 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 SLC25A18P1-201ENST00000449385 454 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 BX276092.4-201ENST00000452056 248 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 RPL23AP40-201ENST00000487630 390 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC105254.2-201ENST00000603636 436 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 U6.105-201ENST00000637379 88 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC034229.2-201ENST00000566945 2508 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AC005261.4-201ENST00000600047 1385 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 HSP90AA4P-202ENST00000506915 2228 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 RPL23AP38-201ENST00000423801 469 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 XIST-210ENST00000602863 775 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 RNU4-89P-201ENST00000607443 133 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AC055839.1-201ENST00000634467 498 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 ERG-210ENST00000442448 5034 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 COX6CP15-201ENST00000426313 211 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms