RNA–Protein interactions for RNA: ENST00000589921.1

LINC00906-206, long intergenic non-protein coding RNA 906, humanhuman

TSL 1 (best) BASIC

Gene LINC00906, Length 3,444 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-206ENST00000589921 NISCHQ9Y2I1 1504 aa12.31□□□□□ -0.44
LINC00906-206ENST00000589921 CHIC1Q5VXU3 224 aa10.78□□□□□ -0.68
LINC00906-206ENST00000589921 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
LINC00906-206ENST00000589921 SHROOM4Q9ULL8 1493 aa10.64□□□□□ -0.71
LINC00906-206ENST00000589921 AEBP2Q6ZN18 517 aaPredicted RBP10.53□□□□□ -0.72
LINC00906-206ENST00000589921 CCDC180Q9P1Z9 1646 aa10.44□□□□□ -0.74
LINC00906-206ENST00000589921 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
LINC00906-206ENST00000589921 ZCCHC6Q5VYS8 1495 aaKnown RBP10.32□□□□□ -0.76
LINC00906-206ENST00000589921 ABCC9O60706 1549 aa10.18□□□□□ -0.78
LINC00906-206ENST00000589921 DCAF1Q9Y4B6 1507 aa9.98□□□□□ -0.81
LINC00906-206ENST00000589921 SCRIBQ14160 1630 aa9.95□□□□□ -0.82
LINC00906-206ENST00000589921 NACADO15069 1562 aa9.81□□□□□ -0.84
LINC00906-206ENST00000589921 PABPN1Q86U42 306 aaKnown RBP eCLIP9.8□□□□□ -0.84
LINC00906-206ENST00000589921 SLC24A1O60721 1099 aa9.78□□□□□ -0.84
LINC00906-206ENST00000589921 PHF23Q9BUL5 403 aaPredicted RBP9.76□□□□□ -0.85
LINC00906-206ENST00000589921 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
LINC00906-206ENST00000589921 RB1CC1Q8TDY2 1594 aa9.74□□□□□ -0.85
LINC00906-206ENST00000589921 RSF1Q96T23 1441 aaPredicted RBP9.71□□□□□ -0.86
LINC00906-206ENST00000589921 CECR2Q9BXF3 1484 aa9.7□□□□□ -0.86
LINC00906-206ENST00000589921 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
LINC00906-206ENST00000589921 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
LINC00906-206ENST00000589921 TRIM41Q8WV44 630 aa9.64□□□□□ -0.87
LINC00906-206ENST00000589921 LOC105371045A0A1W2PR82 267 aa9.62□□□□□ -0.87
LINC00906-206ENST00000589921 MROH2BQ7Z745 1585 aa9.6□□□□□ -0.87
LINC00906-206ENST00000589921 WIZO95785 1651 aa9.52□□□□□ -0.89
LINC00906-206ENST00000589921 BAZ1AQ9NRL2 1556 aaPredicted RBP9.48□□□□□ -0.89
LINC00906-206ENST00000589921 UNC13AQ9UPW8 1703 aa9.45□□□□□ -0.9
LINC00906-206ENST00000589921 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
LINC00906-206ENST00000589921 SMARCA4P51532 1647 aa9.4□□□□□ -0.9
LINC00906-206ENST00000589921 BICRAQ9NZM4 1560 aa9.4□□□□□ -0.91
LINC00906-206ENST00000589921 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
LINC00906-206ENST00000589921 HRCP23327 699 aa9.35□□□□□ -0.91
LINC00906-206ENST00000589921 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
LINC00906-206ENST00000589921 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
LINC00906-206ENST00000589921 BAZ1BQ9UIG0 1483 aaKnown RBP9.29□□□□□ -0.92
LINC00906-206ENST00000589921 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
LINC00906-206ENST00000589921 ABCC8Q09428 1581 aa9.28□□□□□ -0.92
LINC00906-206ENST00000589921 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
LINC00906-206ENST00000589921 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
LINC00906-206ENST00000589921 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.92
LINC00906-206ENST00000589921 SMARCA2P51531 1590 aa9.26□□□□□ -0.93
LINC00906-206ENST00000589921 CSRNP3Q8WYN3 585 aa9.2□□□□□ -0.94
LINC00906-206ENST00000589921 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
LINC00906-206ENST00000589921 SOGA1O94964 1423 aa9.19□□□□□ -0.94
LINC00906-206ENST00000589921 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
LINC00906-206ENST00000589921 EIF4G1Q04637 1599 aaKnown RBP9.17□□□□□ -0.94
LINC00906-206ENST00000589921 RUSC2Q8N2Y8 1516 aa9.14□□□□□ -0.95
LINC00906-206ENST00000589921 PEG3Q9GZU2 1588 aa9.12□□□□□ -0.95
LINC00906-206ENST00000589921 NCAPD3P42695 1498 aa9.11□□□□□ -0.95
LINC00906-206ENST00000589921 KCNA4P22459 653 aa9.1□□□□□ -0.95
LINC00906-206ENST00000589921 PLPPR3Q6T4P5 718 aa9.09□□□□□ -0.95
LINC00906-206ENST00000589921 APLP2Q06481 763 aa9.05□□□□□ -0.96
LINC00906-206ENST00000589921 SYNJ1O43426 1573 aa9.04□□□□□ -0.96
LINC00906-206ENST00000589921 DNAJC5BQ9UF47 199 aa9.03□□□□□ -0.96
LINC00906-206ENST00000589921 EEA1Q15075 1411 aa9.03□□□□□ -0.96
LINC00906-206ENST00000589921 CEP162Q5TB80 1403 aa9.03□□□□□ -0.96
LINC00906-206ENST00000589921 CC2D2AQ9P2K1 1620 aa9.03□□□□□ -0.96
LINC00906-206ENST00000589921 HMGXB3Q12766 1538 aa9.02□□□□□ -0.97
LINC00906-206ENST00000589921 CADPSQ9ULU8 1353 aa9.01□□□□□ -0.97
LINC00906-206ENST00000589921 TNIKQ9UKE5 1360 aa9□□□□□ -0.97
LINC00906-206ENST00000589921 GOLGA3Q08378 1498 aa8.99□□□□□ -0.97
LINC00906-206ENST00000589921 PELP1Q8IZL8 1130 aaKnown RBP8.99□□□□□ -0.97
LINC00906-206ENST00000589921 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
LINC00906-206ENST00000589921 CFTRP13569 1480 aa8.97□□□□□ -0.97
LINC00906-206ENST00000589921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.97□□□□□ -0.97
LINC00906-206ENST00000589921 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.97
LINC00906-206ENST00000589921 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
LINC00906-206ENST00000589921 CLIP1P30622 1438 aa8.95□□□□□ -0.98
LINC00906-206ENST00000589921 RAPGEF2Q9Y4G8 1499 aa8.95□□□□□ -0.98
LINC00906-206ENST00000589921 RTN4Q9NQC3 1192 aaKnown RBP8.95□□□□□ -0.98
LINC00906-206ENST00000589921 NESP48681 1621 aa8.94□□□□□ -0.98
LINC00906-206ENST00000589921 HNRNPUL2Q1KMD3 747 aaKnown RBP8.94□□□□□ -0.98
LINC00906-206ENST00000589921 KIF27Q86VH2 1401 aa8.94□□□□□ -0.98
LINC00906-206ENST00000589921 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
LINC00906-206ENST00000589921 CUX1P39880 1505 aa8.93□□□□□ -0.98
LINC00906-206ENST00000589921 CUX2O14529 1486 aa8.92□□□□□ -0.98
LINC00906-206ENST00000589921 TOP2BQ02880 1626 aa8.91□□□□□ -0.98
LINC00906-206ENST00000589921 FANCD2Q9BXW9 1451 aa8.9□□□□□ -0.98
LINC00906-206ENST00000589921 ZEB1P37275 1124 aaPredicted RBP8.88□□□□□ -0.99
LINC00906-206ENST00000589921 ADRA2BP18089 450 aa8.87□□□□□ -0.99
LINC00906-206ENST00000589921 FGD5Q6ZNL6 1462 aa8.87□□□□□ -0.99
LINC00906-206ENST00000589921 ITGAEP38570 1179 aa8.86□□□□□ -0.99
LINC00906-206ENST00000589921 SCAF1Q9H7N4 1312 aaKnown RBP8.86□□□□□ -0.99
LINC00906-206ENST00000589921 CARMIL1Q5VZK9 1371 aa8.85□□□□□ -0.99
LINC00906-206ENST00000589921 RAD54L2Q9Y4B4 1467 aa8.85□□□□□ -0.99
LINC00906-206ENST00000589921 PRKCSHP14314 528 aaPredicted RBP8.84□□□□□ -0.99
LINC00906-206ENST00000589921 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
LINC00906-206ENST00000589921 IGF1RP08069 1367 aa8.84□□□□□ -0.99
LINC00906-206ENST00000589921 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
LINC00906-206ENST00000589921 KIF21BO75037 1637 aa8.83□□□□□ -1
LINC00906-206ENST00000589921 MYT1Q01538 1121 aa8.83□□□□□ -1
LINC00906-206ENST00000589921 PDS5BQ9NTI5 1447 aa8.82□□□□□ -1
LINC00906-206ENST00000589921 VPS8Q8N3P4 1428 aa8.81□□□□□ -1
LINC00906-206ENST00000589921 PRXQ9BXM0 1461 aa8.81□□□□□ -1
LINC00906-206ENST00000589921 KANK4Q5T7N3 995 aaPredicted RBP8.8□□□□□ -1
LINC00906-206ENST00000589921 TOPBP1Q92547 1522 aa8.78□□□□□ -1
LINC00906-206ENST00000589921 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1.01
LINC00906-206ENST00000589921 FBLN2P98095 1184 aa8.77□□□□□ -1.01
LINC00906-206ENST00000589921 ARID3CA6NKF2 412 aa8.76□□□□□ -1.01
LINC00906-206ENST00000589921 ERICH3Q5RHP9 1530 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms