RNA–Protein interactions for RNA: ENST00000355622.6

TLR4-201, Transcript of toll like receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TLR4, Length 4,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4-201ENST00000355622 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
TLR4-201ENST00000355622 SUPT5HO00267 1087 aaKnown RBP12.72□□□□□ -0.37
TLR4-201ENST00000355622 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
TLR4-201ENST00000355622 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
TLR4-201ENST00000355622 PCGF6Q9BYE7 350 aa12.3□□□□□ -0.44
TLR4-201ENST00000355622 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
TLR4-201ENST00000355622 CENPBP07199 599 aaPredicted RBP12.24□□□□□ -0.45
TLR4-201ENST00000355622 MYT1Q01538 1121 aa12.24□□□□□ -0.45
TLR4-201ENST00000355622 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
TLR4-201ENST00000355622 APLP2Q06481 763 aa12.12□□□□□ -0.47
TLR4-201ENST00000355622 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
TLR4-201ENST00000355622 ZEB1P37275 1124 aaPredicted RBP12.08□□□□□ -0.48
TLR4-201ENST00000355622 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
TLR4-201ENST00000355622 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
TLR4-201ENST00000355622 NISCHQ9Y2I1 1504 aa11.93□□□□□ -0.5
TLR4-201ENST00000355622 YTHDC1Q96MU7 727 aaKnown RBP11.92□□□□□ -0.5
TLR4-201ENST00000355622 NEFLP07196 543 aa11.88□□□□□ -0.51
TLR4-201ENST00000355622 HRCP23327 699 aa11.75□□□□□ -0.53
TLR4-201ENST00000355622 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.53
TLR4-201ENST00000355622 TRIM41Q8WV44 630 aa11.71□□□□□ -0.53
TLR4-201ENST00000355622 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
TLR4-201ENST00000355622 PPARGC1BQ86YN6 1023 aaKnown RBP11.6□□□□□ -0.55
TLR4-201ENST00000355622 UBTFP17480 764 aaKnown RBP11.59□□□□□ -0.55
TLR4-201ENST00000355622 ATP1B4Q9UN42 357 aaPredicted RBP11.57□□□□□ -0.56
TLR4-201ENST00000355622 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
TLR4-201ENST00000355622 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
TLR4-201ENST00000355622 DIEXFQ68CQ4 756 aaKnown RBP11.4□□□□□ -0.58
TLR4-201ENST00000355622 LOC105371045A0A1W2PR82 267 aa11.38□□□□□ -0.59
TLR4-201ENST00000355622 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
TLR4-201ENST00000355622 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
TLR4-201ENST00000355622 ITGAEP38570 1179 aa11.32□□□□□ -0.6
TLR4-201ENST00000355622 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
TLR4-201ENST00000355622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.3□□□□□ -0.6
TLR4-201ENST00000355622 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
TLR4-201ENST00000355622 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
TLR4-201ENST00000355622 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
TLR4-201ENST00000355622 BCANQ96GW7 911 aa11.25□□□□□ -0.61
TLR4-201ENST00000355622 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
TLR4-201ENST00000355622 ACIN1Q9UKV3 1341 aaKnown RBP11.15□□□□□ -0.62
TLR4-201ENST00000355622 CDK11AQ9UQ88 783 aaPredicted RBP11.15□□□□□ -0.62
TLR4-201ENST00000355622 EIF5BO60841 1220 aaKnown RBP11.05□□□□□ -0.64
TLR4-201ENST00000355622 ANP32CO43423 234 aa11.02□□□□□ -0.65
TLR4-201ENST00000355622 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
TLR4-201ENST00000355622 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
TLR4-201ENST00000355622 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
TLR4-201ENST00000355622 ANP32AP39687 249 aaKnown RBP10.98□□□□□ -0.65
TLR4-201ENST00000355622 FAM50AQ14320 339 aaKnown RBP10.94□□□□□ -0.66
TLR4-201ENST00000355622 NPM2Q86SE8 214 aaKnown RBP10.9□□□□□ -0.66
TLR4-201ENST00000355622 TRIM52Q96A61 297 aa10.9□□□□□ -0.67
TLR4-201ENST00000355622 FKBP8Q14318 412 aa10.89□□□□□ -0.67
TLR4-201ENST00000355622 GLIPR1L2Q4G1C9 344 aa10.88□□□□□ -0.67
TLR4-201ENST00000355622 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
TLR4-201ENST00000355622 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
TLR4-201ENST00000355622 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
TLR4-201ENST00000355622 CANXP27824 592 aaKnown RBP10.82□□□□□ -0.68
TLR4-201ENST00000355622 BCL11AQ9H165 835 aa10.81□□□□□ -0.68
TLR4-201ENST00000355622 NBR1Q14596 966 aa10.8□□□□□ -0.68
TLR4-201ENST00000355622 ANP32BQ92688 251 aaKnown RBP10.79□□□□□ -0.68
TLR4-201ENST00000355622 HNRNPUQ00839 825 aaKnown RBP eCLIP10.74□□□□□ -0.69
TLR4-201ENST00000355622 HSP90AA1P07900 732 aaKnown RBP10.7□□□□□ -0.7
TLR4-201ENST00000355622 DDX10Q13206 875 aaKnown RBP10.68□□□□□ -0.7
TLR4-201ENST00000355622 CCDC136Q96JN2 1154 aa10.68□□□□□ -0.7
TLR4-201ENST00000355622 UPF2Q9HAU5 1272 aaKnown RBP10.68□□□□□ -0.7
TLR4-201ENST00000355622 ARXQ96QS3 562 aa10.68□□□□□ -0.7
TLR4-201ENST00000355622 FAM9BQ8IZU0 186 aa10.66□□□□□ -0.7
TLR4-201ENST00000355622 ANP32EQ9BTT0 268 aa10.66□□□□□ -0.7
TLR4-201ENST00000355622 MIER1Q8N108 512 aa10.64□□□□□ -0.71
TLR4-201ENST00000355622 NEFMP07197 916 aa10.63□□□□□ -0.71
TLR4-201ENST00000355622 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
TLR4-201ENST00000355622 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
TLR4-201ENST00000355622 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
TLR4-201ENST00000355622 TONSLQ96HA7 1378 aa10.57□□□□□ -0.72
TLR4-201ENST00000355622 CSRNP3Q8WYN3 585 aa10.57□□□□□ -0.72
TLR4-201ENST00000355622 DCAF1Q9Y4B6 1507 aa10.55□□□□□ -0.72
TLR4-201ENST00000355622 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
TLR4-201ENST00000355622 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
TLR4-201ENST00000355622 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
TLR4-201ENST00000355622 P3H3Q8IVL6 736 aa10.52□□□□□ -0.72
TLR4-201ENST00000355622 TRIM44Q96DX7 344 aaPredicted RBP10.51□□□□□ -0.73
TLR4-201ENST00000355622 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
TLR4-201ENST00000355622 ERICH6BQ5W0A0 696 aa10.49□□□□□ -0.73
TLR4-201ENST00000355622 DDRGK1Q96HY6 314 aa10.48□□□□□ -0.73
TLR4-201ENST00000355622 ARID3CA6NKF2 412 aa10.47□□□□□ -0.73
TLR4-201ENST00000355622 TNNT2P45379 298 aaPredicted RBP10.47□□□□□ -0.73
TLR4-201ENST00000355622 HIRIP3Q9BW71 556 aaPredicted RBP10.45□□□□□ -0.74
TLR4-201ENST00000355622 BECN1Q14457 450 aa10.45□□□□□ -0.74
TLR4-201ENST00000355622 PPM1GO15355 546 aaPredicted RBP10.44□□□□□ -0.74
TLR4-201ENST00000355622 ZNF777Q9ULD5 760 aaPredicted RBP10.44□□□□□ -0.74
TLR4-201ENST00000355622 NAP1L5Q96NT1 182 aaPredicted RBP10.42□□□□□ -0.74
TLR4-201ENST00000355622 SUPT16HQ9Y5B9 1047 aaKnown RBP10.42□□□□□ -0.74
TLR4-201ENST00000355622 WDR43Q15061 677 aaKnown RBP eCLIP10.41□□□□□ -0.74
TLR4-201ENST00000355622 LAS1LQ9Y4W2 734 aaKnown RBP10.4□□□□□ -0.74
TLR4-201ENST00000355622 NOP58Q9Y2X3 529 aaKnown RBP10.39□□□□□ -0.75
TLR4-201ENST00000355622 GOLGA6L22H0YM25 854 aa10.39□□□□□ -0.75
TLR4-201ENST00000355622 FBLN2P98095 1184 aa10.37□□□□□ -0.75
TLR4-201ENST00000355622 DNTTIP2Q5QJE6 756 aaKnown RBP10.36□□□□□ -0.75
TLR4-201ENST00000355622 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
TLR4-201ENST00000355622 NCLP19338 710 aaKnown RBP10.36□□□□□ -0.75
TLR4-201ENST00000355622 DEKP35659 375 aaKnown RBP10.36□□□□□ -0.75
TLR4-201ENST00000355622 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms