RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 NISCHQ9Y2I1 1504 aa12.3□□□□□ -0.44
PBRM1-207ENST00000409767 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
PBRM1-207ENST00000409767 ABCC9O60706 1549 aa11.12□□□□□ -0.63
PBRM1-207ENST00000409767 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
PBRM1-207ENST00000409767 CCDC180Q9P1Z9 1646 aa10.65□□□□□ -0.7
PBRM1-207ENST00000409767 SHROOM4Q9ULL8 1493 aa10.6□□□□□ -0.71
PBRM1-207ENST00000409767 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
PBRM1-207ENST00000409767 RB1CC1Q8TDY2 1594 aa10.5□□□□□ -0.73
PBRM1-207ENST00000409767 NACADO15069 1562 aa10.36□□□□□ -0.75
PBRM1-207ENST00000409767 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-207ENST00000409767 SCRIBQ14160 1630 aa10.21□□□□□ -0.78
PBRM1-207ENST00000409767 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
PBRM1-207ENST00000409767 APLP2Q06481 763 aa10.06□□□□□ -0.8
PBRM1-207ENST00000409767 ERCC6Q03468 1493 aa10□□□□□ -0.81
PBRM1-207ENST00000409767 MYO15BQ96JP2 1530 aa9.97□□□□□ -0.81
PBRM1-207ENST00000409767 CECR2Q9BXF3 1484 aa9.96□□□□□ -0.81
PBRM1-207ENST00000409767 DCAF1Q9Y4B6 1507 aa9.96□□□□□ -0.82
PBRM1-207ENST00000409767 FBLN2P98095 1184 aa9.94□□□□□ -0.82
PBRM1-207ENST00000409767 TRIM41Q8WV44 630 aa9.9□□□□□ -0.83
PBRM1-207ENST00000409767 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
PBRM1-207ENST00000409767 BAZ1BQ9UIG0 1483 aaKnown RBP9.83□□□□□ -0.84
PBRM1-207ENST00000409767 DNAJC5BQ9UF47 199 aa9.8□□□□□ -0.84
PBRM1-207ENST00000409767 TTBK1Q5TCY1 1321 aaPredicted RBP9.78□□□□□ -0.84
PBRM1-207ENST00000409767 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
PBRM1-207ENST00000409767 NPM1P06748 294 aaKnown RBP eCLIP9.74□□□□□ -0.85
PBRM1-207ENST00000409767 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
PBRM1-207ENST00000409767 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-207ENST00000409767 SMARCA2P51531 1590 aa9.72□□□□□ -0.85
PBRM1-207ENST00000409767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.85
PBRM1-207ENST00000409767 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.85
PBRM1-207ENST00000409767 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.86
PBRM1-207ENST00000409767 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-207ENST00000409767 CHMP7Q8WUX9 453 aaPredicted RBP9.69□□□□□ -0.86
PBRM1-207ENST00000409767 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
PBRM1-207ENST00000409767 EIF4G1Q04637 1599 aaKnown RBP9.66□□□□□ -0.86
PBRM1-207ENST00000409767 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
PBRM1-207ENST00000409767 CC2D2AQ9P2K1 1620 aa9.62□□□□□ -0.87
PBRM1-207ENST00000409767 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
PBRM1-207ENST00000409767 CADPSQ9ULU8 1353 aa9.56□□□□□ -0.88
PBRM1-207ENST00000409767 OSCARQ8IYS5 282 aa9.56□□□□□ -0.88
PBRM1-207ENST00000409767 NCAPD3P42695 1498 aa9.53□□□□□ -0.88
PBRM1-207ENST00000409767 CEP164Q9UPV0 1460 aa9.5□□□□□ -0.89
PBRM1-207ENST00000409767 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-207ENST00000409767 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-207ENST00000409767 BICRAQ9NZM4 1560 aa9.49□□□□□ -0.89
PBRM1-207ENST00000409767 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
PBRM1-207ENST00000409767 AEBP2Q6ZN18 517 aaPredicted RBP9.44□□□□□ -0.9
PBRM1-207ENST00000409767 MROH2BQ7Z745 1585 aa9.43□□□□□ -0.9
PBRM1-207ENST00000409767 CHIC1Q5VXU3 224 aa9.43□□□□□ -0.9
PBRM1-207ENST00000409767 PELP1Q8IZL8 1130 aaKnown RBP9.43□□□□□ -0.9
PBRM1-207ENST00000409767 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
PBRM1-207ENST00000409767 ESF1Q9H501 851 aaKnown RBP9.4□□□□□ -0.9
PBRM1-207ENST00000409767 FANCD2Q9BXW9 1451 aa9.4□□□□□ -0.9
PBRM1-207ENST00000409767 ABCC8Q09428 1581 aa9.4□□□□□ -0.9
PBRM1-207ENST00000409767 CCER1Q8TC90 406 aaPredicted RBP9.39□□□□□ -0.91
PBRM1-207ENST00000409767 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
PBRM1-207ENST00000409767 CDK11AQ9UQ88 783 aaPredicted RBP9.38□□□□□ -0.91
PBRM1-207ENST00000409767 HMGXB3Q12766 1538 aa9.36□□□□□ -0.91
PBRM1-207ENST00000409767 SOGA1O94964 1423 aa9.36□□□□□ -0.91
PBRM1-207ENST00000409767 MRC2Q9UBG0 1479 aa9.35□□□□□ -0.91
PBRM1-207ENST00000409767 WRNQ14191 1432 aaPredicted RBP eCLIP9.35□□□□□ -0.91
PBRM1-207ENST00000409767 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
PBRM1-207ENST00000409767 CUX2O14529 1486 aa9.31□□□□□ -0.92
PBRM1-207ENST00000409767 TDRD9Q8NDG6 1382 aaKnown RBP9.31□□□□□ -0.92
PBRM1-207ENST00000409767 UNC13AQ9UPW8 1703 aa9.3□□□□□ -0.92
PBRM1-207ENST00000409767 NESP48681 1621 aa9.3□□□□□ -0.92
PBRM1-207ENST00000409767 ARID3CA6NKF2 412 aa9.3□□□□□ -0.92
PBRM1-207ENST00000409767 P3H3Q8IVL6 736 aa9.3□□□□□ -0.92
PBRM1-207ENST00000409767 CCDC88BA6NC98 1476 aa9.29□□□□□ -0.92
PBRM1-207ENST00000409767 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
PBRM1-207ENST00000409767 LAMC3Q9Y6N6 1575 aa9.28□□□□□ -0.92
PBRM1-207ENST00000409767 CSRNP3Q8WYN3 585 aa9.28□□□□□ -0.92
PBRM1-207ENST00000409767 KIF27Q86VH2 1401 aa9.28□□□□□ -0.92
PBRM1-207ENST00000409767 PLPPR3Q6T4P5 718 aa9.25□□□□□ -0.93
PBRM1-207ENST00000409767 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
PBRM1-207ENST00000409767 WIZO95785 1651 aa9.25□□□□□ -0.93
PBRM1-207ENST00000409767 ARID4BQ4LE39 1312 aaPredicted RBP9.25□□□□□ -0.93
PBRM1-207ENST00000409767 CARMIL2Q6F5E8 1435 aa9.24□□□□□ -0.93
PBRM1-207ENST00000409767 IFT140Q96RY7 1462 aa9.23□□□□□ -0.93
PBRM1-207ENST00000409767 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
PBRM1-207ENST00000409767 ITGAEP38570 1179 aa9.22□□□□□ -0.93
PBRM1-207ENST00000409767 LOC105371045A0A1W2PR82 267 aa9.21□□□□□ -0.93
PBRM1-207ENST00000409767 PLEKHD1A6NEE1 506 aa9.21□□□□□ -0.93
PBRM1-207ENST00000409767 CFTRP13569 1480 aa9.19□□□□□ -0.94
PBRM1-207ENST00000409767 PPARGC1BQ86YN6 1023 aaKnown RBP9.18□□□□□ -0.94
PBRM1-207ENST00000409767 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
PBRM1-207ENST00000409767 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
PBRM1-207ENST00000409767 CENPBP07199 599 aaPredicted RBP9.16□□□□□ -0.94
PBRM1-207ENST00000409767 CARMIL1Q5VZK9 1371 aa9.15□□□□□ -0.94
PBRM1-207ENST00000409767 FAM50AQ14320 339 aaKnown RBP9.15□□□□□ -0.94
PBRM1-207ENST00000409767 BCANQ96GW7 911 aa9.13□□□□□ -0.95
PBRM1-207ENST00000409767 AQRO60306 1485 aaKnown RBP eCLIP9.13□□□□□ -0.951e-6■■■□□ 17.7
PBRM1-207ENST00000409767 GRIN2BQ13224 1484 aa9.12□□□□□ -0.95
PBRM1-207ENST00000409767 GAPVD1Q14C86 1478 aa9.12□□□□□ -0.95
PBRM1-207ENST00000409767 FAM69CQ0P6D2 419 aa9.12□□□□□ -0.95
PBRM1-207ENST00000409767 STAG3Q9UJ98 1225 aa9.1□□□□□ -0.95
PBRM1-207ENST00000409767 FGD5Q6ZNL6 1462 aa9.09□□□□□ -0.95
PBRM1-207ENST00000409767 TRIM52Q96A61 297 aa9.09□□□□□ -0.95
PBRM1-207ENST00000409767 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
PBRM1-207ENST00000409767 PTPRGP23470 1445 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms