RNA–Protein interactions for RNA: ENST00000436139.6

RASGEF1B-203, Transcript of RasGEF domain family member 1B, humanhuman

TSL 1 (best) BASIC

Gene RASGEF1B, Length 6,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1B-203ENST00000436139 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
RASGEF1B-203ENST00000436139 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
RASGEF1B-203ENST00000436139 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
RASGEF1B-203ENST00000436139 NISCHQ9Y2I1 1504 aa13.55□□□□□ -0.24
RASGEF1B-203ENST00000436139 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
RASGEF1B-203ENST00000436139 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
RASGEF1B-203ENST00000436139 APLP2Q06481 763 aa13.14□□□□□ -0.31
RASGEF1B-203ENST00000436139 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
RASGEF1B-203ENST00000436139 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
RASGEF1B-203ENST00000436139 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
RASGEF1B-203ENST00000436139 TTBK1Q5TCY1 1321 aaPredicted RBP12.96□□□□□ -0.33
RASGEF1B-203ENST00000436139 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
RASGEF1B-203ENST00000436139 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
RASGEF1B-203ENST00000436139 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
RASGEF1B-203ENST00000436139 MYT1Q01538 1121 aa12.85□□□□□ -0.35
RASGEF1B-203ENST00000436139 RANGAP1P46060 587 aaPredicted RBP12.7□□□□□ -0.38
RASGEF1B-203ENST00000436139 NEFLP07196 543 aa12.7□□□□□ -0.38
RASGEF1B-203ENST00000436139 YTHDC1Q96MU7 727 aaKnown RBP12.7□□□□□ -0.38
RASGEF1B-203ENST00000436139 TRIM41Q8WV44 630 aa12.68□□□□□ -0.38
RASGEF1B-203ENST00000436139 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
RASGEF1B-203ENST00000436139 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
RASGEF1B-203ENST00000436139 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
RASGEF1B-203ENST00000436139 PPARGC1BQ86YN6 1023 aaKnown RBP12.44□□□□□ -0.42
RASGEF1B-203ENST00000436139 HRCP23327 699 aa12.44□□□□□ -0.42
RASGEF1B-203ENST00000436139 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
RASGEF1B-203ENST00000436139 ABCC9O60706 1549 aa12.24□□□□□ -0.45
RASGEF1B-203ENST00000436139 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
RASGEF1B-203ENST00000436139 ITGAEP38570 1179 aa12.22□□□□□ -0.45
RASGEF1B-203ENST00000436139 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
RASGEF1B-203ENST00000436139 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
RASGEF1B-203ENST00000436139 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.46
RASGEF1B-203ENST00000436139 DIEXFQ68CQ4 756 aaKnown RBP12.14□□□□□ -0.47
RASGEF1B-203ENST00000436139 ZNF316A6NFI3 1004 aaPredicted RBP12.11□□□□□ -0.47
RASGEF1B-203ENST00000436139 CNGB1Q14028 1251 aaPredicted RBP12.1□□□□□ -0.47
RASGEF1B-203ENST00000436139 CHIC1Q5VXU3 224 aa12.09□□□□□ -0.47
RASGEF1B-203ENST00000436139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
RASGEF1B-203ENST00000436139 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
RASGEF1B-203ENST00000436139 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
RASGEF1B-203ENST00000436139 CLSPNQ9HAW4 1339 aa12.01□□□□□ -0.49
RASGEF1B-203ENST00000436139 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
RASGEF1B-203ENST00000436139 BCANQ96GW7 911 aa11.95□□□□□ -0.5
RASGEF1B-203ENST00000436139 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
RASGEF1B-203ENST00000436139 CDK11AQ9UQ88 783 aaPredicted RBP11.91□□□□□ -0.5
RASGEF1B-203ENST00000436139 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.51
RASGEF1B-203ENST00000436139 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
RASGEF1B-203ENST00000436139 ANP32CO43423 234 aa11.86□□□□□ -0.51
RASGEF1B-203ENST00000436139 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
RASGEF1B-203ENST00000436139 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
RASGEF1B-203ENST00000436139 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
RASGEF1B-203ENST00000436139 ANP32AP39687 249 aaKnown RBP11.72□□□□□ -0.53
RASGEF1B-203ENST00000436139 FBLN2P98095 1184 aa11.71□□□□□ -0.53
RASGEF1B-203ENST00000436139 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
RASGEF1B-203ENST00000436139 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
RASGEF1B-203ENST00000436139 NPM2Q86SE8 214 aaKnown RBP11.64□□□□□ -0.55
RASGEF1B-203ENST00000436139 BCL11AQ9H165 835 aa11.6□□□□□ -0.55
RASGEF1B-203ENST00000436139 FKBP8Q14318 412 aa11.59□□□□□ -0.55
RASGEF1B-203ENST00000436139 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
RASGEF1B-203ENST00000436139 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
RASGEF1B-203ENST00000436139 NEFMP07197 916 aa11.54□□□□□ -0.56
RASGEF1B-203ENST00000436139 ANP32BQ92688 251 aaKnown RBP11.54□□□□□ -0.56
RASGEF1B-203ENST00000436139 GLIPR1L2Q4G1C9 344 aa11.48□□□□□ -0.57
RASGEF1B-203ENST00000436139 DCAF1Q9Y4B6 1507 aa11.47□□□□□ -0.57
RASGEF1B-203ENST00000436139 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
RASGEF1B-203ENST00000436139 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
RASGEF1B-203ENST00000436139 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
RASGEF1B-203ENST00000436139 UPF2Q9HAU5 1272 aaKnown RBP11.46□□□□□ -0.57
RASGEF1B-203ENST00000436139 NBR1Q14596 966 aa11.45□□□□□ -0.58
RASGEF1B-203ENST00000436139 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
RASGEF1B-203ENST00000436139 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
RASGEF1B-203ENST00000436139 SCRIBQ14160 1630 aa11.44□□□□□ -0.58
RASGEF1B-203ENST00000436139 FAM9BQ8IZU0 186 aa11.43□□□□□ -0.58
RASGEF1B-203ENST00000436139 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
RASGEF1B-203ENST00000436139 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
RASGEF1B-203ENST00000436139 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
RASGEF1B-203ENST00000436139 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
RASGEF1B-203ENST00000436139 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
RASGEF1B-203ENST00000436139 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.59
RASGEF1B-203ENST00000436139 CCDC136Q96JN2 1154 aa11.39□□□□□ -0.59
RASGEF1B-203ENST00000436139 CCDC180Q9P1Z9 1646 aa11.35□□□□□ -0.59
RASGEF1B-203ENST00000436139 SALL2Q9Y467 1007 aaPredicted RBP11.35□□□□□ -0.59
RASGEF1B-203ENST00000436139 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
RASGEF1B-203ENST00000436139 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
RASGEF1B-203ENST00000436139 ARXQ96QS3 562 aa11.34□□□□□ -0.59
RASGEF1B-203ENST00000436139 TMC1Q8TDI8 760 aa11.32□□□□□ -0.6
RASGEF1B-203ENST00000436139 MIER1Q8N108 512 aa11.3□□□□□ -0.6
RASGEF1B-203ENST00000436139 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
RASGEF1B-203ENST00000436139 WDR43Q15061 677 aaKnown RBP eCLIP11.28□□□□□ -0.6
RASGEF1B-203ENST00000436139 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
RASGEF1B-203ENST00000436139 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
RASGEF1B-203ENST00000436139 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
RASGEF1B-203ENST00000436139 PLPPR3Q6T4P5 718 aa11.25□□□□□ -0.61
RASGEF1B-203ENST00000436139 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
RASGEF1B-203ENST00000436139 CHMP7Q8WUX9 453 aaPredicted RBP11.22□□□□□ -0.61
RASGEF1B-203ENST00000436139 ANP32EQ9BTT0 268 aa11.22□□□□□ -0.61
RASGEF1B-203ENST00000436139 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
RASGEF1B-203ENST00000436139 BECN1Q14457 450 aa11.21□□□□□ -0.61
RASGEF1B-203ENST00000436139 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.62
RASGEF1B-203ENST00000436139 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
RASGEF1B-203ENST00000436139 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
RASGEF1B-203ENST00000436139 HIRIP3Q9BW71 556 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms