RNA–Protein interactions for RNA: ENST00000377879.7

LINC01545-201, Transcript of long intergenic non-protein coding RNA 1545, humanhuman

TSL 1 (best) BASIC

Gene LINC01545, Length 521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01545-201ENST00000377879 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
LINC01545-201ENST00000377879 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
LINC01545-201ENST00000377879 POTEDQ86YR6 584 aa14.52□□□□□ -0.09
LINC01545-201ENST00000377879 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
LINC01545-201ENST00000377879 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
LINC01545-201ENST00000377879 FOXD1Q16676 465 aa13.34□□□□□ -0.27
LINC01545-201ENST00000377879 MSH5O43196 834 aa12.9□□□□□ -0.34
LINC01545-201ENST00000377879 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
LINC01545-201ENST00000377879 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
LINC01545-201ENST00000377879 PPP6R1Q9UPN7 881 aa11.61□□□□□ -0.55
LINC01545-201ENST00000377879 ADRA2BP18089 450 aa11.5□□□□□ -0.57
LINC01545-201ENST00000377879 POTEHQ6S545 545 aa11.15□□□□□ -0.62
LINC01545-201ENST00000377879 DMRT2Q9Y5R5 561 aa11.05□□□□□ -0.64
LINC01545-201ENST00000377879 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
LINC01545-201ENST00000377879 RNF39Q9H2S5 420 aa10.91□□□□□ -0.66
LINC01545-201ENST00000377879 MAPK8IP2Q13387 824 aaPredicted RBP10.9□□□□□ -0.66
LINC01545-201ENST00000377879 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
LINC01545-201ENST00000377879 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
LINC01545-201ENST00000377879 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
LINC01545-201ENST00000377879 HOXD11P31277 338 aaPredicted RBP10.2□□□□□ -0.78
LINC01545-201ENST00000377879 DNAJC5BQ9UF47 199 aa10.06□□□□□ -0.8
LINC01545-201ENST00000377879 SP7Q8TDD2 431 aaPredicted RBP9.92□□□□□ -0.82
LINC01545-201ENST00000377879 DSG3P32926 999 aa9.84□□□□□ -0.83
LINC01545-201ENST00000377879 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
LINC01545-201ENST00000377879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC01545-201ENST00000377879 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
LINC01545-201ENST00000377879 PLSCR2Q9NRY7 297 aa9.66□□□□□ -0.86
LINC01545-201ENST00000377879 CAPN15O75808 1086 aa9.62□□□□□ -0.87
LINC01545-201ENST00000377879 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
LINC01545-201ENST00000377879 SPINK5Q9NQ38 1064 aaPredicted RBP9.6□□□□□ -0.87
LINC01545-201ENST00000377879 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
LINC01545-201ENST00000377879 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
LINC01545-201ENST00000377879 U3KPZ7 1027 aaPredicted RBP9.4□□□□□ -0.9
LINC01545-201ENST00000377879 HAX1O00165 279 aa9.32□□□□□ -0.92
LINC01545-201ENST00000377879 ABCB7O75027 752 aa9.31□□□□□ -0.92
LINC01545-201ENST00000377879 LHX8Q68G74 356 aa9.29□□□□□ -0.92
LINC01545-201ENST00000377879 NISCHQ9Y2I1 1504 aa9.21□□□□□ -0.94
LINC01545-201ENST00000377879 TRHP20396 242 aaPredicted RBP9.2□□□□□ -0.94
LINC01545-201ENST00000377879 PIP4P2Q8N4L2 257 aa9.19□□□□□ -0.94
LINC01545-201ENST00000377879 EVX2Q03828 476 aa9.14□□□□□ -0.95
LINC01545-201ENST00000377879 ZNF219Q9P2Y4 722 aaPredicted RBP9.13□□□□□ -0.95
LINC01545-201ENST00000377879 APLP2Q06481 763 aa8.98□□□□□ -0.97
LINC01545-201ENST00000377879 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC01545-201ENST00000377879 AKT1S1Q96B36 256 aa8.95□□□□□ -0.98
LINC01545-201ENST00000377879 ABCC9O60706 1549 aa8.91□□□□□ -0.98
LINC01545-201ENST00000377879 REM2Q8IYK8 340 aaPredicted RBP8.88□□□□□ -0.99
LINC01545-201ENST00000377879 GABBR2O75899 941 aa8.86□□□□□ -0.99
LINC01545-201ENST00000377879 POTEMA6NI47 508 aa8.82□□□□□ -1
LINC01545-201ENST00000377879 PITPNM1O00562 1244 aa8.81□□□□□ -1
LINC01545-201ENST00000377879 NCBP3Q53F19 620 aaKnown RBP8.81□□□□□ -1
LINC01545-201ENST00000377879 POTEGQ6S5H5 508 aa8.74□□□□□ -1.01
LINC01545-201ENST00000377879 C19orf67A6NJJ6 358 aa8.71□□□□□ -1.02
LINC01545-201ENST00000377879 NPM3O75607 178 aaKnown RBP8.71□□□□□ -1.02
LINC01545-201ENST00000377879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
LINC01545-201ENST00000377879 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
LINC01545-201ENST00000377879 PCDH10Q9P2E7 1040 aa8.7□□□□□ -1.02
LINC01545-201ENST00000377879 POLA2Q14181 598 aa8.69□□□□□ -1.02
LINC01545-201ENST00000377879 POTEIP0CG38 1075 aa8.68□□□□□ -1.02
LINC01545-201ENST00000377879 SLC4A2P04920 1241 aa8.62□□□□□ -1.03
LINC01545-201ENST00000377879 SAMD1Q6SPF0 538 aaPredicted RBP8.61□□□□□ -1.03
LINC01545-201ENST00000377879 PRKAR2AP13861 404 aaKnown RBP8.56□□□□□ -1.04
LINC01545-201ENST00000377879 OTUD5Q96G74 571 aa8.55□□□□□ -1.04
LINC01545-201ENST00000377879 OSCARQ8IYS5 282 aa8.48□□□□□ -1.05
LINC01545-201ENST00000377879 ZBTB12Q9Y330 459 aaPredicted RBP8.41□□□□□ -1.06
LINC01545-201ENST00000377879 DCBLD2Q96PD2 775 aa8.37□□□□□ -1.07
LINC01545-201ENST00000377879 CCDC180Q9P1Z9 1646 aa8.36□□□□□ -1.07
LINC01545-201ENST00000377879 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
LINC01545-201ENST00000377879 DNAJC5Q9H3Z4 198 aa8.35□□□□□ -1.07
LINC01545-201ENST00000377879 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
LINC01545-201ENST00000377879 PABPN1Q86U42 306 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC01545-201ENST00000377879 CLCN6P51797 869 aa8.3□□□□□ -1.08
LINC01545-201ENST00000377879 CLEC11AQ9Y240 323 aa8.25□□□□□ -1.09
LINC01545-201ENST00000377879 CHADLQ6NUI6 762 aa8.23□□□□□ -1.09
LINC01545-201ENST00000377879 CD44P16070 742 aaKnown RBP8.22□□□□□ -1.09
LINC01545-201ENST00000377879 SPDYE1Q8NFV5 336 aaPredicted RBP8.21□□□□□ -1.1
LINC01545-201ENST00000377879 RB1CC1Q8TDY2 1594 aa8.2□□□□□ -1.1
LINC01545-201ENST00000377879 FAM163AQ96GL9 167 aaPredicted RBP8.19□□□□□ -1.1
LINC01545-201ENST00000377879 CDAN1Q8IWY9 1227 aa8.17□□□□□ -1.1
LINC01545-201ENST00000377879 DCAF8L2P0C7V8 631 aa8.15□□□□□ -1.1
LINC01545-201ENST00000377879 MMRN1Q13201 1228 aa8.1□□□□□ -1.11
LINC01545-201ENST00000377879 SPDYE2BA6NHP3 402 aa8.08□□□□□ -1.12
LINC01545-201ENST00000377879 MYCNP04198 464 aaPredicted RBP8.08□□□□□ -1.12
LINC01545-201ENST00000377879 SPDYE6P0CI01 402 aa8.08□□□□□ -1.12
LINC01545-201ENST00000377879 SPDYE2Q495Y8 402 aa8.08□□□□□ -1.12
LINC01545-201ENST00000377879 UNC13AQ9UPW8 1703 aa8.08□□□□□ -1.12
LINC01545-201ENST00000377879 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
LINC01545-201ENST00000377879 KCNA4P22459 653 aa8.05□□□□□ -1.12
LINC01545-201ENST00000377879 ZNF579Q8NAF0 562 aaKnown RBP8.05□□□□□ -1.12
LINC01545-201ENST00000377879 GALR2O43603 387 aaPredicted RBP8.04□□□□□ -1.12
LINC01545-201ENST00000377879 CECR2Q9BXF3 1484 aa8.04□□□□□ -1.12
LINC01545-201ENST00000377879 NACADO15069 1562 aa8.04□□□□□ -1.12
LINC01545-201ENST00000377879 MAMSTRQ6ZN01 415 aa8.03□□□□□ -1.12
LINC01545-201ENST00000377879 BICRAQ9NZM4 1560 aa8.02□□□□□ -1.13
LINC01545-201ENST00000377879 ATF5Q9Y2D1 282 aaPredicted RBP8□□□□□ -1.13
LINC01545-201ENST00000377879 SPNS2Q8IVW8 549 aa7.99□□□□□ -1.13
LINC01545-201ENST00000377879 CC2D2AQ9P2K1 1620 aa7.99□□□□□ -1.13
LINC01545-201ENST00000377879 PELP1Q8IZL8 1130 aaKnown RBP7.98□□□□□ -1.13
LINC01545-201ENST00000377879 FARP1Q9Y4F1 1045 aaPredicted RBP7.98□□□□□ -1.13
LINC01545-201ENST00000377879 PRR29P0C7W0 189 aa7.95□□□□□ -1.14
LINC01545-201ENST00000377879 SCUBE2Q9NQ36 999 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms