RNA–Protein interactions for RNA: ENST00000554307.1

AF123462.1-201, humanhuman

TSL 3 BASIC

Gene AF123462.1, Length 446 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF123462.1-201ENST00000554307 AEBP2Q6ZN18 517 aaPredicted RBP14.07□□□□□ -0.16
AF123462.1-201ENST00000554307 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
AF123462.1-201ENST00000554307 PHF23Q9BUL5 403 aaPredicted RBP12.08□□□□□ -0.48
AF123462.1-201ENST00000554307 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
AF123462.1-201ENST00000554307 PLPPR3Q6T4P5 718 aa11.2□□□□□ -0.62
AF123462.1-201ENST00000554307 FOXD1Q16676 465 aa11.11□□□□□ -0.63
AF123462.1-201ENST00000554307 ADRA2BP18089 450 aa10.67□□□□□ -0.7
AF123462.1-201ENST00000554307 PPP6R1Q9UPN7 881 aa10.66□□□□□ -0.7
AF123462.1-201ENST00000554307 POTEDQ86YR6 584 aa10.62□□□□□ -0.71
AF123462.1-201ENST00000554307 NISCHQ9Y2I1 1504 aa10.57□□□□□ -0.72
AF123462.1-201ENST00000554307 PIAS4Q8N2W9 510 aaPredicted RBP10.51□□□□□ -0.73
AF123462.1-201ENST00000554307 MSH5O43196 834 aa10.45□□□□□ -0.74
AF123462.1-201ENST00000554307 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
AF123462.1-201ENST00000554307 SCAF1Q9H7N4 1312 aaKnown RBP9.8□□□□□ -0.84
AF123462.1-201ENST00000554307 MAPK8IP2Q13387 824 aaPredicted RBP9.67□□□□□ -0.86
AF123462.1-201ENST00000554307 KCNA4P22459 653 aa9.65□□□□□ -0.86
AF123462.1-201ENST00000554307 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
AF123462.1-201ENST00000554307 CNKSR2Q8WXI2 1034 aa9.58□□□□□ -0.88
AF123462.1-201ENST00000554307 DMRT2Q9Y5R5 561 aa9.55□□□□□ -0.88
AF123462.1-201ENST00000554307 CCDC180Q9P1Z9 1646 aa9.49□□□□□ -0.89
AF123462.1-201ENST00000554307 ABCC9O60706 1549 aa9.47□□□□□ -0.89
AF123462.1-201ENST00000554307 NPM3O75607 178 aaKnown RBP9.47□□□□□ -0.89
AF123462.1-201ENST00000554307 RNF216Q9NWF9 866 aaPredicted RBP9.39□□□□□ -0.91
AF123462.1-201ENST00000554307 HOXD11P31277 338 aaPredicted RBP9.33□□□□□ -0.92
AF123462.1-201ENST00000554307 SLC4A1APQ9BWU0 796 aaKnown RBP9.22□□□□□ -0.93
AF123462.1-201ENST00000554307 DCAF8L1A6NGE4 600 aa9.2□□□□□ -0.94
AF123462.1-201ENST00000554307 DNAJC5BQ9UF47 199 aa9.15□□□□□ -0.94
AF123462.1-201ENST00000554307 CACNB1Q02641 598 aaPredicted RBP9.12□□□□□ -0.95
AF123462.1-201ENST00000554307 EHMT2Q96KQ7 1210 aa9.1□□□□□ -0.95
AF123462.1-201ENST00000554307 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
AF123462.1-201ENST00000554307 NACADO15069 1562 aa8.99□□□□□ -0.97
AF123462.1-201ENST00000554307 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.98
AF123462.1-201ENST00000554307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.96□□□□□ -0.98
AF123462.1-201ENST00000554307 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
AF123462.1-201ENST00000554307 RNF39Q9H2S5 420 aa8.92□□□□□ -0.98
AF123462.1-201ENST00000554307 FOXD4L1Q9NU39 408 aa8.9□□□□□ -0.98
AF123462.1-201ENST00000554307 DCAF8L2P0C7V8 631 aa8.89□□□□□ -0.99
AF123462.1-201ENST00000554307 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
AF123462.1-201ENST00000554307 ZBTB22O15209 634 aa8.87□□□□□ -0.99
AF123462.1-201ENST00000554307 PABPN1Q86U42 306 aaKnown RBP eCLIP8.82□□□□□ -1
AF123462.1-201ENST00000554307 UNC13AQ9UPW8 1703 aa8.79□□□□□ -1
AF123462.1-201ENST00000554307 U3KPZ7 1027 aaPredicted RBP8.78□□□□□ -1
AF123462.1-201ENST00000554307 MYCNP04198 464 aaPredicted RBP8.77□□□□□ -1.01
AF123462.1-201ENST00000554307 BICRAQ9NZM4 1560 aa8.77□□□□□ -1.01
AF123462.1-201ENST00000554307 ZCCHC6Q5VYS8 1495 aaKnown RBP8.76□□□□□ -1.01
AF123462.1-201ENST00000554307 DCAF1Q9Y4B6 1507 aa8.75□□□□□ -1.01
AF123462.1-201ENST00000554307 C1QBPQ07021 282 aaKnown RBP8.75□□□□□ -1.01
AF123462.1-201ENST00000554307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
AF123462.1-201ENST00000554307 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
AF123462.1-201ENST00000554307 SHROOM4Q9ULL8 1493 aa8.7□□□□□ -1.02
AF123462.1-201ENST00000554307 SAMD1Q6SPF0 538 aaPredicted RBP8.67□□□□□ -1.02
AF123462.1-201ENST00000554307 APLP2Q06481 763 aa8.63□□□□□ -1.03
AF123462.1-201ENST00000554307 SCRIBQ14160 1630 aa8.61□□□□□ -1.03
AF123462.1-201ENST00000554307 CC2D2AQ9P2K1 1620 aa8.57□□□□□ -1.04
AF123462.1-201ENST00000554307 ATXN8OSP0DMR3 200 aa8.56□□□□□ -1.04
AF123462.1-201ENST00000554307 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
AF123462.1-201ENST00000554307 EIF4G1Q04637 1599 aaKnown RBP8.56□□□□□ -1.04
AF123462.1-201ENST00000554307 CAPN15O75808 1086 aa8.54□□□□□ -1.04
AF123462.1-201ENST00000554307 SPINK5Q9NQ38 1064 aaPredicted RBP8.53□□□□□ -1.04
AF123462.1-201ENST00000554307 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
AF123462.1-201ENST00000554307 ATF5Q9Y2D1 282 aaPredicted RBP8.5□□□□□ -1.05
AF123462.1-201ENST00000554307 ZNF219Q9P2Y4 722 aaPredicted RBP8.48□□□□□ -1.05
AF123462.1-201ENST00000554307 ABCB7O75027 752 aa8.38□□□□□ -1.07
AF123462.1-201ENST00000554307 DSG3P32926 999 aa8.34□□□□□ -1.07
AF123462.1-201ENST00000554307 POLA2Q14181 598 aa8.33□□□□□ -1.08
AF123462.1-201ENST00000554307 NCAPD3P42695 1498 aa8.31□□□□□ -1.08
AF123462.1-201ENST00000554307 POTEHQ6S545 545 aa8.27□□□□□ -1.09
AF123462.1-201ENST00000554307 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
AF123462.1-201ENST00000554307 SMARCA2P51531 1590 aa8.23□□□□□ -1.09
AF123462.1-201ENST00000554307 SMARCA4P51532 1647 aa8.23□□□□□ -1.09
AF123462.1-201ENST00000554307 DNAJC5Q9H3Z4 198 aa8.23□□□□□ -1.09
AF123462.1-201ENST00000554307 HMGXB3Q12766 1538 aa8.23□□□□□ -1.09
AF123462.1-201ENST00000554307 ZBTB12Q9Y330 459 aaPredicted RBP8.22□□□□□ -1.09
AF123462.1-201ENST00000554307 CUX2O14529 1486 aa8.21□□□□□ -1.09
AF123462.1-201ENST00000554307 BAZ1AQ9NRL2 1556 aaPredicted RBP8.21□□□□□ -1.1
AF123462.1-201ENST00000554307 FBLN2P98095 1184 aa8.2□□□□□ -1.1
AF123462.1-201ENST00000554307 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
AF123462.1-201ENST00000554307 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
AF123462.1-201ENST00000554307 BAZ1BQ9UIG0 1483 aaKnown RBP8.17□□□□□ -1.1
AF123462.1-201ENST00000554307 NESP48681 1621 aa8.14□□□□□ -1.11
AF123462.1-201ENST00000554307 MKRN4PQ13434 485 aaPredicted RBP8.13□□□□□ -1.11
AF123462.1-201ENST00000554307 MROH2BQ7Z745 1585 aa8.13□□□□□ -1.11
AF123462.1-201ENST00000554307 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
AF123462.1-201ENST00000554307 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
AF123462.1-201ENST00000554307 FKBP8Q14318 412 aa8.07□□□□□ -1.12
AF123462.1-201ENST00000554307 THOC2Q8NI27 1593 aaKnown RBP8.06□□□□□ -1.12
AF123462.1-201ENST00000554307 PDS5BQ9NTI5 1447 aa8.06□□□□□ -1.12
AF123462.1-201ENST00000554307 CADPSQ9ULU8 1353 aa8.04□□□□□ -1.12
AF123462.1-201ENST00000554307 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
AF123462.1-201ENST00000554307 WIZO95785 1651 aa8.01□□□□□ -1.13
AF123462.1-201ENST00000554307 SPDYE4A6NLX3 237 aa7.99□□□□□ -1.13
AF123462.1-201ENST00000554307 RBM42Q9BTD8 480 aaKnown RBP7.99□□□□□ -1.13
AF123462.1-201ENST00000554307 MRC2Q9UBG0 1479 aa7.99□□□□□ -1.13
AF123462.1-201ENST00000554307 SPDYE2BA6NHP3 402 aa7.98□□□□□ -1.13
AF123462.1-201ENST00000554307 SPDYE6P0CI01 402 aa7.98□□□□□ -1.13
AF123462.1-201ENST00000554307 SPDYE2Q495Y8 402 aa7.98□□□□□ -1.13
AF123462.1-201ENST00000554307 WDR62O43379 1518 aa7.97□□□□□ -1.13
AF123462.1-201ENST00000554307 RSF1Q96T23 1441 aaPredicted RBP7.96□□□□□ -1.13
AF123462.1-201ENST00000554307 ZNF692Q9BU19 519 aaPredicted RBP7.96□□□□□ -1.14
AF123462.1-201ENST00000554307 CFTRP13569 1480 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms