RNA–Protein interactions for RNA: ENST00000377495.1

TMEM236-201, Transcript of transmembrane protein 236, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM236, Length 5,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM236-201ENST00000377495 NISCHQ9Y2I1 1504 aa16.36■□□□□ 0.21
TMEM236-201ENST00000377495 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
TMEM236-201ENST00000377495 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
TMEM236-201ENST00000377495 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
TMEM236-201ENST00000377495 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
TMEM236-201ENST00000377495 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
TMEM236-201ENST00000377495 APLP2Q06481 763 aa13.73□□□□□ -0.21
TMEM236-201ENST00000377495 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
TMEM236-201ENST00000377495 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
TMEM236-201ENST00000377495 FAM9AQ8IZU1 332 aaPredicted RBP13.6□□□□□ -0.23
TMEM236-201ENST00000377495 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
TMEM236-201ENST00000377495 ABCC9O60706 1549 aa13.53□□□□□ -0.24
TMEM236-201ENST00000377495 PCGF6Q9BYE7 350 aa13.48□□□□□ -0.25
TMEM236-201ENST00000377495 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
TMEM236-201ENST00000377495 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
TMEM236-201ENST00000377495 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
TMEM236-201ENST00000377495 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
TMEM236-201ENST00000377495 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
TMEM236-201ENST00000377495 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
TMEM236-201ENST00000377495 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
TMEM236-201ENST00000377495 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
TMEM236-201ENST00000377495 NACADO15069 1562 aa13.22□□□□□ -0.29
TMEM236-201ENST00000377495 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
TMEM236-201ENST00000377495 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
TMEM236-201ENST00000377495 PABPN1Q86U42 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM236-201ENST00000377495 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
TMEM236-201ENST00000377495 HRCP23327 699 aa13.09□□□□□ -0.31
TMEM236-201ENST00000377495 LOC105371045A0A1W2PR82 267 aa13.09□□□□□ -0.31
TMEM236-201ENST00000377495 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
TMEM236-201ENST00000377495 MYO15BQ96JP2 1530 aa12.96□□□□□ -0.33
TMEM236-201ENST00000377495 PPARGC1BQ86YN6 1023 aaKnown RBP12.91□□□□□ -0.34
TMEM236-201ENST00000377495 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
TMEM236-201ENST00000377495 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
TMEM236-201ENST00000377495 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
TMEM236-201ENST00000377495 EEA1Q15075 1411 aa12.78□□□□□ -0.36
TMEM236-201ENST00000377495 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
TMEM236-201ENST00000377495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
TMEM236-201ENST00000377495 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.37
TMEM236-201ENST00000377495 ITGAEP38570 1179 aa12.7□□□□□ -0.38
TMEM236-201ENST00000377495 NEFLP07196 543 aa12.7□□□□□ -0.38
TMEM236-201ENST00000377495 GOLGA3Q08378 1498 aa12.63□□□□□ -0.39
TMEM236-201ENST00000377495 FAM50AQ14320 339 aaKnown RBP12.63□□□□□ -0.39
TMEM236-201ENST00000377495 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
TMEM236-201ENST00000377495 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.39
TMEM236-201ENST00000377495 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
TMEM236-201ENST00000377495 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
TMEM236-201ENST00000377495 TOP2AP11388 1531 aaKnown RBP12.58□□□□□ -0.4
TMEM236-201ENST00000377495 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
TMEM236-201ENST00000377495 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
TMEM236-201ENST00000377495 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
TMEM236-201ENST00000377495 ERICH6Q7L0X2 663 aa12.52□□□□□ -0.4
TMEM236-201ENST00000377495 TNIKQ9UKE5 1360 aa12.51□□□□□ -0.41
TMEM236-201ENST00000377495 CLIP1P30622 1438 aa12.51□□□□□ -0.41
TMEM236-201ENST00000377495 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
TMEM236-201ENST00000377495 CEP162Q5TB80 1403 aa12.49□□□□□ -0.41
TMEM236-201ENST00000377495 KIF27Q86VH2 1401 aa12.48□□□□□ -0.41
TMEM236-201ENST00000377495 TRIM52Q96A61 297 aa12.47□□□□□ -0.41
TMEM236-201ENST00000377495 SMARCA4P51532 1647 aa12.47□□□□□ -0.41
TMEM236-201ENST00000377495 CCDC88BA6NC98 1476 aa12.47□□□□□ -0.41
TMEM236-201ENST00000377495 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.41
TMEM236-201ENST00000377495 CDK11AQ9UQ88 783 aaPredicted RBP12.46□□□□□ -0.41
TMEM236-201ENST00000377495 WIZO95785 1651 aa12.46□□□□□ -0.41
TMEM236-201ENST00000377495 MYT1Q01538 1121 aa12.44□□□□□ -0.42
TMEM236-201ENST00000377495 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
TMEM236-201ENST00000377495 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
TMEM236-201ENST00000377495 FBLN2P98095 1184 aa12.38□□□□□ -0.43
TMEM236-201ENST00000377495 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
TMEM236-201ENST00000377495 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
TMEM236-201ENST00000377495 ANP32CO43423 234 aa12.33□□□□□ -0.44
TMEM236-201ENST00000377495 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
TMEM236-201ENST00000377495 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
TMEM236-201ENST00000377495 MTUS2Q5JR59 1369 aa12.28□□□□□ -0.44
TMEM236-201ENST00000377495 CLSPNQ9HAW4 1339 aa12.27□□□□□ -0.45
TMEM236-201ENST00000377495 FHAD1B1AJZ9 1412 aa12.26□□□□□ -0.45
TMEM236-201ENST00000377495 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
TMEM236-201ENST00000377495 SOGA1O94964 1423 aa12.26□□□□□ -0.45
TMEM236-201ENST00000377495 CUX2O14529 1486 aa12.23□□□□□ -0.45
TMEM236-201ENST00000377495 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
TMEM236-201ENST00000377495 CHMP7Q8WUX9 453 aaPredicted RBP12.2□□□□□ -0.46
TMEM236-201ENST00000377495 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
TMEM236-201ENST00000377495 CARMIL1Q5VZK9 1371 aa12.2□□□□□ -0.46
TMEM236-201ENST00000377495 ZNF777Q9ULD5 760 aaPredicted RBP12.19□□□□□ -0.46
TMEM236-201ENST00000377495 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
TMEM236-201ENST00000377495 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
TMEM236-201ENST00000377495 ZNF326Q5BKZ1 582 aaKnown RBP12.14□□□□□ -0.47
TMEM236-201ENST00000377495 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
TMEM236-201ENST00000377495 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
TMEM236-201ENST00000377495 GTF3C3Q9Y5Q9 886 aa12.11□□□□□ -0.47
TMEM236-201ENST00000377495 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
TMEM236-201ENST00000377495 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
TMEM236-201ENST00000377495 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
TMEM236-201ENST00000377495 CCNB3Q8WWL7 1395 aa12.08□□□□□ -0.47
TMEM236-201ENST00000377495 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
TMEM236-201ENST00000377495 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
TMEM236-201ENST00000377495 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
TMEM236-201ENST00000377495 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
TMEM236-201ENST00000377495 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
TMEM236-201ENST00000377495 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
TMEM236-201ENST00000377495 CNGB1Q14028 1251 aaPredicted RBP12.06□□□□□ -0.48
TMEM236-201ENST00000377495 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms