Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
HLA-CQ95604 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 MFSD8-227ENST00000641393 4069 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 PARP1P1-201ENST00000413631 3026 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 RNU6-1120P-201ENST00000362988 108 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 RNU6-43P-201ENST00000384302 107 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 RNU6-331P-201ENST00000384724 107 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AL353133.1-201ENST00000407695 401 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 AC073136.2-201ENST00000417282 849 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 MTCO2P27-201ENST00000420740 428 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 OR10T1P-201ENST00000424327 947 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 FUNDC2P2-202ENST00000443452 493 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 TRGVB-201ENST00000453257 471 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 RN7SL83P-201ENST00000468131 297 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AC138409.2-202ENST00000507274 458 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 AC106800.2-201ENST00000514009 1103 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 RNU6-150P-201ENST00000516237 95 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 SNORA40.12-201ENST00000516329 111 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AL031846.1-201ENST00000560933 314 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 MIR3154-201ENST00000577829 84 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 DPPA3P3-201ENST00000603842 430 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.74□□□□□ -1.17
HLA-CQ95604 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 AC020978.6-201ENST00000571197 3177 ntBASIC7.74□□□□□ -1.17
HLA-CQ95604 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC7.74□□□□□ -1.17
HLA-CQ95604 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HLA-CQ95604 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
HLA-CQ95604 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
HLA-CQ95604 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.73□□□□□ -1.17
HLA-CQ95604 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HLA-CQ95604 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 RNA5SP435-201ENST00000364044 108 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-CQ95604 RNU6-1105P-201ENST00000384774 107 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-CQ95604 RPL5P18-201ENST00000406671 891 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 GAPDHP42-201ENST00000406848 981 ntBASIC7.73□□□□□ -1.17
HLA-CQ95604 RPSAP72-201ENST00000407020 358 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms