RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
GAPDHP42-201ENST00000406848 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
GAPDHP42-201ENST00000406848 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
GAPDHP42-201ENST00000406848 SENP3Q9H4L4 574 aaPredicted RBP16.41■□□□□ 0.22
GAPDHP42-201ENST00000406848 FOXD1Q16676 465 aa15.3■□□□□ 0.04
GAPDHP42-201ENST00000406848 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
GAPDHP42-201ENST00000406848 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
GAPDHP42-201ENST00000406848 ADRA2BP18089 450 aa14.63□□□□□ -0.07
GAPDHP42-201ENST00000406848 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
GAPDHP42-201ENST00000406848 MSH5O43196 834 aa14.09□□□□□ -0.15
GAPDHP42-201ENST00000406848 NISCHQ9Y2I1 1504 aa13.51□□□□□ -0.25
GAPDHP42-201ENST00000406848 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
GAPDHP42-201ENST00000406848 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
GAPDHP42-201ENST00000406848 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
GAPDHP42-201ENST00000406848 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
GAPDHP42-201ENST00000406848 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
GAPDHP42-201ENST00000406848 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
GAPDHP42-201ENST00000406848 KCNA4P22459 653 aa12.96□□□□□ -0.33
GAPDHP42-201ENST00000406848 NCBP3Q53F19 620 aaKnown RBP12.92□□□□□ -0.34
GAPDHP42-201ENST00000406848 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
GAPDHP42-201ENST00000406848 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
GAPDHP42-201ENST00000406848 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
GAPDHP42-201ENST00000406848 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
GAPDHP42-201ENST00000406848 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
GAPDHP42-201ENST00000406848 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
GAPDHP42-201ENST00000406848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
GAPDHP42-201ENST00000406848 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
GAPDHP42-201ENST00000406848 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
GAPDHP42-201ENST00000406848 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
GAPDHP42-201ENST00000406848 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
GAPDHP42-201ENST00000406848 ZBTB22O15209 634 aa11.94□□□□□ -0.5
GAPDHP42-201ENST00000406848 C1QBPQ07021 282 aaKnown RBP11.91□□□□□ -0.5
GAPDHP42-201ENST00000406848 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
GAPDHP42-201ENST00000406848 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
GAPDHP42-201ENST00000406848 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
GAPDHP42-201ENST00000406848 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
GAPDHP42-201ENST00000406848 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
GAPDHP42-201ENST00000406848 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
GAPDHP42-201ENST00000406848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
GAPDHP42-201ENST00000406848 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
GAPDHP42-201ENST00000406848 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
GAPDHP42-201ENST00000406848 ABCC9O60706 1549 aa11.65□□□□□ -0.55
GAPDHP42-201ENST00000406848 CAPN15O75808 1086 aa11.64□□□□□ -0.55
GAPDHP42-201ENST00000406848 APLP2Q06481 763 aa11.59□□□□□ -0.55
GAPDHP42-201ENST00000406848 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
GAPDHP42-201ENST00000406848 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
GAPDHP42-201ENST00000406848 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
GAPDHP42-201ENST00000406848 DSG3P32926 999 aa11.48□□□□□ -0.57
GAPDHP42-201ENST00000406848 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
GAPDHP42-201ENST00000406848 ABCB7O75027 752 aa11.45□□□□□ -0.58
GAPDHP42-201ENST00000406848 POLA2Q14181 598 aa11.35□□□□□ -0.59
GAPDHP42-201ENST00000406848 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
GAPDHP42-201ENST00000406848 NACADO15069 1562 aa11.34□□□□□ -0.59
GAPDHP42-201ENST00000406848 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
GAPDHP42-201ENST00000406848 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
GAPDHP42-201ENST00000406848 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
GAPDHP42-201ENST00000406848 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
GAPDHP42-201ENST00000406848 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
GAPDHP42-201ENST00000406848 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
GAPDHP42-201ENST00000406848 FBLN2P98095 1184 aa11□□□□□ -0.65
GAPDHP42-201ENST00000406848 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
GAPDHP42-201ENST00000406848 SHROOM4Q9ULL8 1493 aa10.97□□□□□ -0.65
GAPDHP42-201ENST00000406848 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
GAPDHP42-201ENST00000406848 BICRAQ9NZM4 1560 aa10.89□□□□□ -0.67
GAPDHP42-201ENST00000406848 RBM42Q9BTD8 480 aaKnown RBP10.88□□□□□ -0.67
GAPDHP42-201ENST00000406848 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
GAPDHP42-201ENST00000406848 SCRIBQ14160 1630 aa10.85□□□□□ -0.67
GAPDHP42-201ENST00000406848 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
GAPDHP42-201ENST00000406848 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
GAPDHP42-201ENST00000406848 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
GAPDHP42-201ENST00000406848 ZNF692Q9BU19 519 aaPredicted RBP10.76□□□□□ -0.69
GAPDHP42-201ENST00000406848 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
GAPDHP42-201ENST00000406848 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
GAPDHP42-201ENST00000406848 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
GAPDHP42-201ENST00000406848 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
GAPDHP42-201ENST00000406848 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
GAPDHP42-201ENST00000406848 EIF4G1Q04637 1599 aaKnown RBP10.63□□□□□ -0.71
GAPDHP42-201ENST00000406848 FKBP8Q14318 412 aa10.61□□□□□ -0.71
GAPDHP42-201ENST00000406848 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
GAPDHP42-201ENST00000406848 CC2D2AQ9P2K1 1620 aa10.56□□□□□ -0.72
GAPDHP42-201ENST00000406848 CHRDL2Q6WN34 429 aa10.53□□□□□ -0.72
GAPDHP42-201ENST00000406848 CLEC11AQ9Y240 323 aa10.52□□□□□ -0.73
GAPDHP42-201ENST00000406848 CECR2Q9BXF3 1484 aa10.52□□□□□ -0.73
GAPDHP42-201ENST00000406848 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
GAPDHP42-201ENST00000406848 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
GAPDHP42-201ENST00000406848 BAZ1AQ9NRL2 1556 aaPredicted RBP10.5□□□□□ -0.73
GAPDHP42-201ENST00000406848 PROM2Q8N271 834 aa10.49□□□□□ -0.73
GAPDHP42-201ENST00000406848 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
GAPDHP42-201ENST00000406848 NCAPD3P42695 1498 aa10.46□□□□□ -0.74
GAPDHP42-201ENST00000406848 SMARCA2P51531 1590 aa10.45□□□□□ -0.74
GAPDHP42-201ENST00000406848 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
GAPDHP42-201ENST00000406848 PEG3Q9GZU2 1588 aa10.42□□□□□ -0.74
GAPDHP42-201ENST00000406848 ATAD2BQ9ULI0 1458 aa10.42□□□□□ -0.74
GAPDHP42-201ENST00000406848 HMGXB3Q12766 1538 aa10.39□□□□□ -0.75
GAPDHP42-201ENST00000406848 PIP4P2Q8N4L2 257 aa10.38□□□□□ -0.75
GAPDHP42-201ENST00000406848 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
GAPDHP42-201ENST00000406848 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
GAPDHP42-201ENST00000406848 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
GAPDHP42-201ENST00000406848 POTEHQ6S545 545 aa10.35□□□□□ -0.75
GAPDHP42-201ENST00000406848 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
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