RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
PKHD1-201ENST00000340994 MYT1Q01538 1121 aa13.52□□□□□ -0.24
PKHD1-201ENST00000340994 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
PKHD1-201ENST00000340994 CENPBP07199 599 aaPredicted RBP12.89□□□□□ -0.35
PKHD1-201ENST00000340994 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
PKHD1-201ENST00000340994 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
PKHD1-201ENST00000340994 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
PKHD1-201ENST00000340994 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
PKHD1-201ENST00000340994 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
PKHD1-201ENST00000340994 APLP2Q06481 763 aa12.56□□□□□ -0.4
PKHD1-201ENST00000340994 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
PKHD1-201ENST00000340994 NEFLP07196 543 aa12.51□□□□□ -0.41
PKHD1-201ENST00000340994 NISCHQ9Y2I1 1504 aa12.49□□□□□ -0.41
PKHD1-201ENST00000340994 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
PKHD1-201ENST00000340994 FAM9AQ8IZU1 332 aaPredicted RBP12.27□□□□□ -0.44
PKHD1-201ENST00000340994 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
PKHD1-201ENST00000340994 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
PKHD1-201ENST00000340994 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
PKHD1-201ENST00000340994 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
PKHD1-201ENST00000340994 HRCP23327 699 aa11.99□□□□□ -0.49
PKHD1-201ENST00000340994 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
PKHD1-201ENST00000340994 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
PKHD1-201ENST00000340994 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
PKHD1-201ENST00000340994 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
PKHD1-201ENST00000340994 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
PKHD1-201ENST00000340994 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
PKHD1-201ENST00000340994 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
PKHD1-201ENST00000340994 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
PKHD1-201ENST00000340994 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
PKHD1-201ENST00000340994 ANP32AP39687 249 aaKnown RBP11.57□□□□□ -0.56
PKHD1-201ENST00000340994 ANP32BQ92688 251 aaKnown RBP11.54□□□□□ -0.56
PKHD1-201ENST00000340994 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
PKHD1-201ENST00000340994 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
PKHD1-201ENST00000340994 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
PKHD1-201ENST00000340994 EIF5BO60841 1220 aaKnown RBP11.44□□□□□ -0.58
PKHD1-201ENST00000340994 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
PKHD1-201ENST00000340994 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
PKHD1-201ENST00000340994 ANP32CO43423 234 aa11.4□□□□□ -0.58
PKHD1-201ENST00000340994 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
PKHD1-201ENST00000340994 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
PKHD1-201ENST00000340994 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
PKHD1-201ENST00000340994 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
PKHD1-201ENST00000340994 BCANQ96GW7 911 aa11.28□□□□□ -0.6
PKHD1-201ENST00000340994 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.6
PKHD1-201ENST00000340994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
PKHD1-201ENST00000340994 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
PKHD1-201ENST00000340994 CANXP27824 592 aaKnown RBP11.25□□□□□ -0.61
PKHD1-201ENST00000340994 ITGAEP38570 1179 aa11.23□□□□□ -0.61
PKHD1-201ENST00000340994 CHIC1Q5VXU3 224 aa11.23□□□□□ -0.61
PKHD1-201ENST00000340994 NEFMP07197 916 aa11.23□□□□□ -0.61
PKHD1-201ENST00000340994 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
PKHD1-201ENST00000340994 DCAF1Q9Y4B6 1507 aa11.19□□□□□ -0.62
PKHD1-201ENST00000340994 TRIM44Q96DX7 344 aaPredicted RBP11.16□□□□□ -0.62
PKHD1-201ENST00000340994 CCDC180Q9P1Z9 1646 aa11.16□□□□□ -0.62
PKHD1-201ENST00000340994 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
PKHD1-201ENST00000340994 NCLP19338 710 aaKnown RBP11.13□□□□□ -0.63
PKHD1-201ENST00000340994 ERICH6BQ5W0A0 696 aa11.12□□□□□ -0.63
PKHD1-201ENST00000340994 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
PKHD1-201ENST00000340994 LOC105371045A0A1W2PR82 267 aa11.1□□□□□ -0.63
PKHD1-201ENST00000340994 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
PKHD1-201ENST00000340994 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
PKHD1-201ENST00000340994 BECN1Q14457 450 aa11.07□□□□□ -0.64
PKHD1-201ENST00000340994 FKBP8Q14318 412 aa11.06□□□□□ -0.64
PKHD1-201ENST00000340994 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
PKHD1-201ENST00000340994 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
PKHD1-201ENST00000340994 NBR1Q14596 966 aa11.05□□□□□ -0.64
PKHD1-201ENST00000340994 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
PKHD1-201ENST00000340994 GOLGA6L22H0YM25 854 aa11.02□□□□□ -0.65
PKHD1-201ENST00000340994 CCDC136Q96JN2 1154 aa11.01□□□□□ -0.65
PKHD1-201ENST00000340994 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
PKHD1-201ENST00000340994 TRIM52Q96A61 297 aa11□□□□□ -0.65
PKHD1-201ENST00000340994 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
PKHD1-201ENST00000340994 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
PKHD1-201ENST00000340994 TONSLQ96HA7 1378 aa10.95□□□□□ -0.66
PKHD1-201ENST00000340994 HNRNPUQ00839 825 aaKnown RBP eCLIP10.93□□□□□ -0.66
PKHD1-201ENST00000340994 ZNF326Q5BKZ1 582 aaKnown RBP10.9□□□□□ -0.67
PKHD1-201ENST00000340994 BCL11AQ9H165 835 aa10.89□□□□□ -0.67
PKHD1-201ENST00000340994 NAP1L5Q96NT1 182 aaPredicted RBP10.89□□□□□ -0.67
PKHD1-201ENST00000340994 MYH16Q9H6N6 1097 aa10.89□□□□□ -0.67
PKHD1-201ENST00000340994 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
PKHD1-201ENST00000340994 GOLGA6L6A8MZA4 724 aa10.87□□□□□ -0.67
PKHD1-201ENST00000340994 PTMAP06454 111 aaKnown RBP10.86□□□□□ -0.67
PKHD1-201ENST00000340994 L1TD1Q5T7N2 865 aaKnown RBP10.85□□□□□ -0.67
PKHD1-201ENST00000340994 NRDCO43847 1150 aa10.84□□□□□ -0.67
PKHD1-201ENST00000340994 DNTTIP2Q5QJE6 756 aaKnown RBP10.83□□□□□ -0.68
PKHD1-201ENST00000340994 ZRSR1Q15695 479 aaKnown RBP10.83□□□□□ -0.68
PKHD1-201ENST00000340994 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
PKHD1-201ENST00000340994 ARXQ96QS3 562 aa10.82□□□□□ -0.68
PKHD1-201ENST00000340994 CASC1Q6TDU7 716 aa10.8□□□□□ -0.68
PKHD1-201ENST00000340994 PTMSP20962 102 aa10.79□□□□□ -0.68
PKHD1-201ENST00000340994 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
PKHD1-201ENST00000340994 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
PKHD1-201ENST00000340994 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
PKHD1-201ENST00000340994 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
PKHD1-201ENST00000340994 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
PKHD1-201ENST00000340994 FAM9BQ8IZU0 186 aa10.74□□□□□ -0.69
PKHD1-201ENST00000340994 MRS2Q9HD23 443 aa10.74□□□□□ -0.69
PKHD1-201ENST00000340994 CHMP4BQ9H444 224 aaKnown RBP10.71□□□□□ -0.7
PKHD1-201ENST00000340994 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
PKHD1-201ENST00000340994 PPP4R2Q9NY27 417 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms