RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
TRGVB-201ENST00000453257 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
TRGVB-201ENST00000453257 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
TRGVB-201ENST00000453257 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
TRGVB-201ENST00000453257 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
TRGVB-201ENST00000453257 FOXD1Q16676 465 aa13.78□□□□□ -0.2
TRGVB-201ENST00000453257 ADRA2BP18089 450 aa13.56□□□□□ -0.24
TRGVB-201ENST00000453257 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
TRGVB-201ENST00000453257 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
TRGVB-201ENST00000453257 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
TRGVB-201ENST00000453257 KCNA4P22459 653 aa12.8□□□□□ -0.36
TRGVB-201ENST00000453257 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
TRGVB-201ENST00000453257 MSH5O43196 834 aa12.62□□□□□ -0.39
TRGVB-201ENST00000453257 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
TRGVB-201ENST00000453257 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
TRGVB-201ENST00000453257 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
TRGVB-201ENST00000453257 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
TRGVB-201ENST00000453257 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
TRGVB-201ENST00000453257 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
TRGVB-201ENST00000453257 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
TRGVB-201ENST00000453257 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
TRGVB-201ENST00000453257 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
TRGVB-201ENST00000453257 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
TRGVB-201ENST00000453257 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
TRGVB-201ENST00000453257 ZBTB22O15209 634 aa11.74□□□□□ -0.53
TRGVB-201ENST00000453257 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
TRGVB-201ENST00000453257 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
TRGVB-201ENST00000453257 DCAF8L1A6NGE4 600 aa11.58□□□□□ -0.56
TRGVB-201ENST00000453257 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
TRGVB-201ENST00000453257 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
TRGVB-201ENST00000453257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRGVB-201ENST00000453257 ATXN8OSP0DMR3 200 aa11.2□□□□□ -0.62
TRGVB-201ENST00000453257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
TRGVB-201ENST00000453257 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
TRGVB-201ENST00000453257 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
TRGVB-201ENST00000453257 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
TRGVB-201ENST00000453257 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
TRGVB-201ENST00000453257 APLP2Q06481 763 aa10.97□□□□□ -0.65
TRGVB-201ENST00000453257 FKBP8Q14318 412 aa10.87□□□□□ -0.67
TRGVB-201ENST00000453257 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
TRGVB-201ENST00000453257 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
TRGVB-201ENST00000453257 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
TRGVB-201ENST00000453257 RNF39Q9H2S5 420 aa10.8□□□□□ -0.68
TRGVB-201ENST00000453257 CAPN15O75808 1086 aa10.77□□□□□ -0.69
TRGVB-201ENST00000453257 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
TRGVB-201ENST00000453257 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
TRGVB-201ENST00000453257 POLA2Q14181 598 aa10.64□□□□□ -0.71
TRGVB-201ENST00000453257 FBLN2P98095 1184 aa10.62□□□□□ -0.71
TRGVB-201ENST00000453257 ABCB7O75027 752 aa10.59□□□□□ -0.71
TRGVB-201ENST00000453257 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
TRGVB-201ENST00000453257 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
TRGVB-201ENST00000453257 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
TRGVB-201ENST00000453257 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
TRGVB-201ENST00000453257 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
TRGVB-201ENST00000453257 DSG3P32926 999 aa10.4□□□□□ -0.74
TRGVB-201ENST00000453257 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
TRGVB-201ENST00000453257 OSCARQ8IYS5 282 aa10.28□□□□□ -0.76
TRGVB-201ENST00000453257 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
TRGVB-201ENST00000453257 PROM2Q8N271 834 aa10.25□□□□□ -0.77
TRGVB-201ENST00000453257 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.77
TRGVB-201ENST00000453257 SPDYE2BA6NHP3 402 aa10.2□□□□□ -0.78
TRGVB-201ENST00000453257 SPDYE6P0CI01 402 aa10.2□□□□□ -0.78
TRGVB-201ENST00000453257 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
TRGVB-201ENST00000453257 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRGVB-201ENST00000453257 SSUH2Q9Y2M2 353 aa10.11□□□□□ -0.79
TRGVB-201ENST00000453257 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
TRGVB-201ENST00000453257 KLHL34Q8N239 644 aa10.06□□□□□ -0.8
TRGVB-201ENST00000453257 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
TRGVB-201ENST00000453257 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
TRGVB-201ENST00000453257 POTEHQ6S545 545 aa9.99□□□□□ -0.81
TRGVB-201ENST00000453257 MIER1Q8N108 512 aa9.99□□□□□ -0.81
TRGVB-201ENST00000453257 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
TRGVB-201ENST00000453257 PLEKHG5O94827 1062 aa9.96□□□□□ -0.82
TRGVB-201ENST00000453257 DCAF8L2P0C7V8 631 aa9.96□□□□□ -0.82
TRGVB-201ENST00000453257 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
TRGVB-201ENST00000453257 SPOCK2Q92563 424 aa9.94□□□□□ -0.82
TRGVB-201ENST00000453257 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
TRGVB-201ENST00000453257 AKT1S1Q96B36 256 aa9.87□□□□□ -0.83
TRGVB-201ENST00000453257 SPDYE1Q8NFV5 336 aaPredicted RBP9.86□□□□□ -0.83
TRGVB-201ENST00000453257 ZBTB47Q9UFB7 747 aaPredicted RBP9.85□□□□□ -0.83
TRGVB-201ENST00000453257 PKD2Q13563 968 aa9.83□□□□□ -0.84
TRGVB-201ENST00000453257 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
TRGVB-201ENST00000453257 CIZ1Q9ULV3 898 aaPredicted RBP9.8□□□□□ -0.84
TRGVB-201ENST00000453257 PRR29P0C7W0 189 aa9.79□□□□□ -0.84
TRGVB-201ENST00000453257 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
TRGVB-201ENST00000453257 PITPNM1O00562 1244 aa9.67□□□□□ -0.86
TRGVB-201ENST00000453257 RGL2O15211 777 aa9.66□□□□□ -0.86
TRGVB-201ENST00000453257 CREBZFQ9NS37 354 aa9.66□□□□□ -0.86
TRGVB-201ENST00000453257 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
TRGVB-201ENST00000453257 DCAF8Q5TAQ9 597 aa9.65□□□□□ -0.86
TRGVB-201ENST00000453257 GSE1Q14687 1217 aa9.64□□□□□ -0.87
TRGVB-201ENST00000453257 TRIM41Q8WV44 630 aa9.61□□□□□ -0.87
TRGVB-201ENST00000453257 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
TRGVB-201ENST00000453257 HAP1P54257 671 aaPredicted RBP9.6□□□□□ -0.87
TRGVB-201ENST00000453257 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.6□□□□□ -0.87
TRGVB-201ENST00000453257 NUBP1P53384 320 aa9.59□□□□□ -0.87
TRGVB-201ENST00000453257 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
TRGVB-201ENST00000453257 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
TRGVB-201ENST00000453257 CHADLQ6NUI6 762 aa9.55□□□□□ -0.88
TRGVB-201ENST00000453257 BBXQ8WY36 941 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms