Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH4P55283 AC098976.1-201ENST00000513014 541 ntBASIC5.31□□□□□ -1.56
CDH4P55283 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH4P55283 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.31□□□□□ -1.56
CDH4P55283 AC027308.1-201ENST00000517993 110 ntBASIC5.31□□□□□ -1.56
CDH4P55283 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH4P55283 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH4P55283 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH4P55283 AC092490.3-201ENST00000545370 572 ntBASIC5.31□□□□□ -1.56
CDH4P55283 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH4P55283 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH4P55283 AC234775.3-201ENST00000564612 656 ntBASIC5.31□□□□□ -1.56
CDH4P55283 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH4P55283 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH4P55283 AL022394.1-201ENST00000606979 292 ntBASIC5.31□□□□□ -1.56
CDH4P55283 AC211433.2-201ENST00000608433 387 ntBASIC5.31□□□□□ -1.56
CDH4P55283 AC022960.2-201ENST00000616300 666 ntBASIC5.31□□□□□ -1.56
CDH4P55283 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDH4P55283 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH4P55283 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH4P55283 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDH4P55283 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDH4P55283 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH4P55283 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.3□□□□□ -1.56
CDH4P55283 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH4P55283 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 SNORA70-201ENST00000384436 135 ntBASIC5.3□□□□□ -1.56
CDH4P55283 MTND4LP21-201ENST00000415303 295 ntBASIC5.3□□□□□ -1.56
CDH4P55283 DDX39BP1-205ENST00000422507 192 ntBASIC5.3□□□□□ -1.56
CDH4P55283 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH4P55283 AC009238.2-201ENST00000431026 355 ntBASIC5.3□□□□□ -1.56
CDH4P55283 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH4P55283 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 BX842559.2-201ENST00000451418 605 ntBASIC5.3□□□□□ -1.56
CDH4P55283 RN7SL515P-201ENST00000463999 297 ntBASIC5.3□□□□□ -1.56
CDH4P55283 AC090114.3-201ENST00000479267 829 ntBASIC5.3□□□□□ -1.56
CDH4P55283 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH4P55283 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH4P55283 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH4P55283 AC147055.3-201ENST00000510547 851 ntBASIC5.3□□□□□ -1.56
CDH4P55283 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.3□□□□□ -1.56
CDH4P55283 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.3□□□□□ -1.56
CDH4P55283 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CDH4P55283 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH4P55283 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH4P55283 AC006272.2-201ENST00000594725 163 ntBASIC5.3□□□□□ -1.56
CDH4P55283 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.3□□□□□ -1.56
CDH4P55283 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 CDC27P2-201ENST00000425026 1922 ntBASIC5.3□□□□□ -1.56
CDH4P55283 HSPA8P18-201ENST00000439846 1928 ntBASIC5.3□□□□□ -1.56
CDH4P55283 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 THAP12P4-201ENST00000528321 2266 ntBASIC5.3□□□□□ -1.56
CDH4P55283 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH4P55283 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH4P55283 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDH4P55283 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CDH4P55283 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH4P55283 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 SCARNA15-201ENST00000607520 4325 ntBASIC5.29□□□□□ -1.56
CDH4P55283 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 SNURFL-201ENST00000309296 343 ntBASIC5.29□□□□□ -1.56
CDH4P55283 RNA5SP305-201ENST00000362665 119 ntBASIC5.29□□□□□ -1.56
CDH4P55283 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH4P55283 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH4P55283 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.29□□□□□ -1.56
CDH4P55283 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH4P55283 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH4P55283 KNOP1P3-201ENST00000446933 426 ntBASIC5.29□□□□□ -1.56
CDH4P55283 CBX1P2-201ENST00000453841 458 ntBASIC5.29□□□□□ -1.56
CDH4P55283 AC020779.1-201ENST00000478757 796 ntBASIC5.29□□□□□ -1.56
CDH4P55283 MORF4L2P1-201ENST00000503761 858 ntBASIC5.29□□□□□ -1.56
CDH4P55283 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CDH4P55283 RN7SKP66-201ENST00000516681 231 ntBASIC5.29□□□□□ -1.56
CDH4P55283 RN7SKP260-201ENST00000516907 149 ntBASIC5.29□□□□□ -1.56
CDH4P55283 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH4P55283 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH4P55283 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH4P55283 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH4P55283 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH4P55283 AC096586.2-201ENST00000610260 441 ntBASIC5.29□□□□□ -1.56
CDH4P55283 AC037198.3-201ENST00000616754 526 ntBASIC5.29□□□□□ -1.56
CDH4P55283 AC015660.5-201ENST00000623238 564 ntBASIC5.29□□□□□ -1.56
CDH4P55283 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH4P55283 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH4P55283 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH4P55283 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms