RNA–Protein interactions for RNA: ENST00000547045.5

APAF1-205, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-205ENST00000547045 NISCHQ9Y2I1 1504 aa11.12□□□□□ -0.63
APAF1-205ENST00000547045 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
APAF1-205ENST00000547045 ABCC9O60706 1549 aa9.83□□□□□ -0.84
APAF1-205ENST00000547045 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
APAF1-205ENST00000547045 SHROOM4Q9ULL8 1493 aa9.44□□□□□ -0.9
APAF1-205ENST00000547045 PABPN1Q86U42 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
APAF1-205ENST00000547045 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
APAF1-205ENST00000547045 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
APAF1-205ENST00000547045 SCRIBQ14160 1630 aa9.16□□□□□ -0.94
APAF1-205ENST00000547045 NACADO15069 1562 aa9.13□□□□□ -0.95
APAF1-205ENST00000547045 SUPT5HO00267 1087 aaKnown RBP9.09□□□□□ -0.95
APAF1-205ENST00000547045 HRCP23327 699 aa8.97□□□□□ -0.97
APAF1-205ENST00000547045 DCAF1Q9Y4B6 1507 aa8.96□□□□□ -0.97
APAF1-205ENST00000547045 DNAJC5BQ9UF47 199 aa8.93□□□□□ -0.98
APAF1-205ENST00000547045 MYO15BQ96JP2 1530 aa8.91□□□□□ -0.98
APAF1-205ENST00000547045 PCGF6Q9BYE7 350 aa8.86□□□□□ -0.99
APAF1-205ENST00000547045 CHIC1Q5VXU3 224 aa8.85□□□□□ -0.99
APAF1-205ENST00000547045 UNC13AQ9UPW8 1703 aa8.84□□□□□ -0.99
APAF1-205ENST00000547045 BICRAQ9NZM4 1560 aa8.84□□□□□ -0.99
APAF1-205ENST00000547045 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
APAF1-205ENST00000547045 EIF4G1Q04637 1599 aaKnown RBP8.7□□□□□ -1.02
APAF1-205ENST00000547045 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
APAF1-205ENST00000547045 ZEB1P37275 1124 aaPredicted RBP8.69□□□□□ -1.02
APAF1-205ENST00000547045 TRIM26Q12899 539 aaPredicted RBP8.67□□□□□ -1.02
APAF1-205ENST00000547045 MROH2BQ7Z745 1585 aa8.66□□□□□ -1.02
APAF1-205ENST00000547045 CC2D2AQ9P2K1 1620 aa8.66□□□□□ -1.02
APAF1-205ENST00000547045 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
APAF1-205ENST00000547045 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
APAF1-205ENST00000547045 BAZ1AQ9NRL2 1556 aaPredicted RBP8.61□□□□□ -1.03
APAF1-205ENST00000547045 BAZ1BQ9UIG0 1483 aaKnown RBP8.61□□□□□ -1.03
APAF1-205ENST00000547045 ATAD2BQ9ULI0 1458 aa8.58□□□□□ -1.04
APAF1-205ENST00000547045 LOC105371045A0A1W2PR82 267 aa8.58□□□□□ -1.04
APAF1-205ENST00000547045 SMARCA4P51532 1647 aa8.58□□□□□ -1.04
APAF1-205ENST00000547045 WIZO95785 1651 aa8.56□□□□□ -1.04
APAF1-205ENST00000547045 SMARCA2P51531 1590 aa8.51□□□□□ -1.05
APAF1-205ENST00000547045 EHMT2Q96KQ7 1210 aa8.5□□□□□ -1.05
APAF1-205ENST00000547045 TRIM41Q8WV44 630 aa8.49□□□□□ -1.05
APAF1-205ENST00000547045 ERCC6Q03468 1493 aa8.49□□□□□ -1.05
APAF1-205ENST00000547045 NCAPD3P42695 1498 aa8.48□□□□□ -1.05
APAF1-205ENST00000547045 NESP48681 1621 aa8.48□□□□□ -1.05
APAF1-205ENST00000547045 FAM9AQ8IZU1 332 aaPredicted RBP8.41□□□□□ -1.06
APAF1-205ENST00000547045 CCDC88BA6NC98 1476 aa8.41□□□□□ -1.06
APAF1-205ENST00000547045 MYT1Q01538 1121 aa8.41□□□□□ -1.06
APAF1-205ENST00000547045 TOP2AP11388 1531 aaKnown RBP8.38□□□□□ -1.07
APAF1-205ENST00000547045 CENPBP07199 599 aaPredicted RBP8.38□□□□□ -1.07
APAF1-205ENST00000547045 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
APAF1-205ENST00000547045 HMGXB3Q12766 1538 aa8.37□□□□□ -1.07
APAF1-205ENST00000547045 FBLN2P98095 1184 aa8.35□□□□□ -1.07
APAF1-205ENST00000547045 CCER1Q8TC90 406 aaPredicted RBP8.34□□□□□ -1.07
APAF1-205ENST00000547045 PDS5BQ9NTI5 1447 aa8.33□□□□□ -1.08
APAF1-205ENST00000547045 SCAF1Q9H7N4 1312 aaKnown RBP8.32□□□□□ -1.08
APAF1-205ENST00000547045 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
APAF1-205ENST00000547045 PEG3Q9GZU2 1588 aa8.3□□□□□ -1.08
APAF1-205ENST00000547045 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
APAF1-205ENST00000547045 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
APAF1-205ENST00000547045 TTBK1Q5TCY1 1321 aaPredicted RBP8.27□□□□□ -1.08
APAF1-205ENST00000547045 CEP164Q9UPV0 1460 aa8.27□□□□□ -1.09
APAF1-205ENST00000547045 CFTRP13569 1480 aa8.24□□□□□ -1.09
APAF1-205ENST00000547045 DIEXFQ68CQ4 756 aaKnown RBP8.24□□□□□ -1.09
APAF1-205ENST00000547045 ABCC8Q09428 1581 aa8.24□□□□□ -1.09
APAF1-205ENST00000547045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.23□□□□□ -1.09
APAF1-205ENST00000547045 TDRD9Q8NDG6 1382 aaKnown RBP8.21□□□□□ -1.09
APAF1-205ENST00000547045 LAMC3Q9Y6N6 1575 aa8.21□□□□□ -1.1
APAF1-205ENST00000547045 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
APAF1-205ENST00000547045 WRNQ14191 1432 aaPredicted RBP eCLIP8.19□□□□□ -1.1
APAF1-205ENST00000547045 NEUROD1Q13562 356 aa8.18□□□□□ -1.1
APAF1-205ENST00000547045 KIF21AQ7Z4S6 1674 aa8.18□□□□□ -1.1
APAF1-205ENST00000547045 MRC2Q9UBG0 1479 aa8.18□□□□□ -1.1
APAF1-205ENST00000547045 RAD54L2Q9Y4B4 1467 aa8.17□□□□□ -1.1
APAF1-205ENST00000547045 SOGA1O94964 1423 aa8.16□□□□□ -1.1
APAF1-205ENST00000547045 CHMP7Q8WUX9 453 aaPredicted RBP8.15□□□□□ -1.1
APAF1-205ENST00000547045 URB2Q14146 1524 aaKnown RBP8.15□□□□□ -1.1
APAF1-205ENST00000547045 AQRO60306 1485 aaKnown RBP eCLIP8.14□□□□□ -1.11
APAF1-205ENST00000547045 ZNF316A6NFI3 1004 aaPredicted RBP8.13□□□□□ -1.11
APAF1-205ENST00000547045 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
APAF1-205ENST00000547045 FGD5Q6ZNL6 1462 aa8.12□□□□□ -1.11
APAF1-205ENST00000547045 TOPBP1Q92547 1522 aa8.12□□□□□ -1.11
APAF1-205ENST00000547045 CUX2O14529 1486 aa8.11□□□□□ -1.11
APAF1-205ENST00000547045 ZNF608Q9ULD9 1512 aaPredicted RBP8.1□□□□□ -1.11
APAF1-205ENST00000547045 APLP2Q06481 763 aa8.09□□□□□ -1.11
APAF1-205ENST00000547045 CUX1P39880 1505 aa8.09□□□□□ -1.11
APAF1-205ENST00000547045 POLA1P09884 1462 aaPredicted RBP8.09□□□□□ -1.11
APAF1-205ENST00000547045 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
APAF1-205ENST00000547045 YTHDC1Q96MU7 727 aaKnown RBP8.08□□□□□ -1.12
APAF1-205ENST00000547045 P3H3Q8IVL6 736 aa8.07□□□□□ -1.12
APAF1-205ENST00000547045 ARID3CA6NKF2 412 aa8.07□□□□□ -1.12
APAF1-205ENST00000547045 SYNJ1O43426 1573 aa8.06□□□□□ -1.12
APAF1-205ENST00000547045 EEA1Q15075 1411 aa8.05□□□□□ -1.12
APAF1-205ENST00000547045 DNMBPQ6XZF7 1577 aa8.05□□□□□ -1.12
APAF1-205ENST00000547045 CEP162Q5TB80 1403 aa8.04□□□□□ -1.12
APAF1-205ENST00000547045 THOC2Q8NI27 1593 aaKnown RBP8.04□□□□□ -1.12
APAF1-205ENST00000547045 OSCARQ8IYS5 282 aa8.04□□□□□ -1.12
APAF1-205ENST00000547045 TNIKQ9UKE5 1360 aa8.04□□□□□ -1.12
APAF1-205ENST00000547045 RUSC2Q8N2Y8 1516 aa8.03□□□□□ -1.12
APAF1-205ENST00000547045 CSRNP3Q8WYN3 585 aa8.03□□□□□ -1.12
APAF1-205ENST00000547045 WDR62O43379 1518 aa8.02□□□□□ -1.13
APAF1-205ENST00000547045 IFT140Q96RY7 1462 aa8.02□□□□□ -1.13
APAF1-205ENST00000547045 CLSPNQ9HAW4 1339 aa8.02□□□□□ -1.13
APAF1-205ENST00000547045 KIF27Q86VH2 1401 aa8.01□□□□□ -1.13
APAF1-205ENST00000547045 GAPVD1Q14C86 1478 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms