RNA–Protein interactions for RNA: ENST00000399054.6

MKKS-202, Transcript of McKusick-Kaufman syndrome, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKKS, Length 2,663 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKKS-202ENST00000399054 AEBP2Q6ZN18 517 aaPredicted RBP14.56□□□□□ -0.08
MKKS-202ENST00000399054 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
MKKS-202ENST00000399054 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
MKKS-202ENST00000399054 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
MKKS-202ENST00000399054 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
MKKS-202ENST00000399054 FOXD1Q16676 465 aa11.43□□□□□ -0.58
MKKS-202ENST00000399054 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
MKKS-202ENST00000399054 ADRA2BP18089 450 aa11.1□□□□□ -0.63
MKKS-202ENST00000399054 PIAS4Q8N2W9 510 aaPredicted RBP10.8□□□□□ -0.68
MKKS-202ENST00000399054 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
MKKS-202ENST00000399054 MSH5O43196 834 aa10.5□□□□□ -0.73
MKKS-202ENST00000399054 PPP4R3CPQ6ZMV5 832 aa10.37□□□□□ -0.75
MKKS-202ENST00000399054 KCNA4P22459 653 aa10.29□□□□□ -0.76
MKKS-202ENST00000399054 SCAF1Q9H7N4 1312 aaKnown RBP10.2□□□□□ -0.78
MKKS-202ENST00000399054 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
MKKS-202ENST00000399054 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
MKKS-202ENST00000399054 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.8
MKKS-202ENST00000399054 NPM3O75607 178 aaKnown RBP10□□□□□ -0.81
MKKS-202ENST00000399054 DMRT2Q9Y5R5 561 aa9.89□□□□□ -0.83
MKKS-202ENST00000399054 RNF216Q9NWF9 866 aaPredicted RBP9.83□□□□□ -0.84
MKKS-202ENST00000399054 SLC4A1APQ9BWU0 796 aaKnown RBP9.83□□□□□ -0.84
MKKS-202ENST00000399054 HOXD11P31277 338 aaPredicted RBP9.76□□□□□ -0.85
MKKS-202ENST00000399054 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
MKKS-202ENST00000399054 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
MKKS-202ENST00000399054 HRCP23327 699 aa9.59□□□□□ -0.88
MKKS-202ENST00000399054 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
MKKS-202ENST00000399054 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
MKKS-202ENST00000399054 CSRNP3Q8WYN3 585 aa9.56□□□□□ -0.88
MKKS-202ENST00000399054 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
MKKS-202ENST00000399054 PCGF6Q9BYE7 350 aa9.48□□□□□ -0.89
MKKS-202ENST00000399054 ZBTB22O15209 634 aa9.47□□□□□ -0.89
MKKS-202ENST00000399054 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
MKKS-202ENST00000399054 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
MKKS-202ENST00000399054 SLC4A2P04920 1241 aa9.4□□□□□ -0.9
MKKS-202ENST00000399054 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
MKKS-202ENST00000399054 POTEDQ86YR6 584 aa9.27□□□□□ -0.93
MKKS-202ENST00000399054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.25□□□□□ -0.93
MKKS-202ENST00000399054 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
MKKS-202ENST00000399054 MYCNP04198 464 aaPredicted RBP9.24□□□□□ -0.93
MKKS-202ENST00000399054 LOC105371045A0A1W2PR82 267 aa9.22□□□□□ -0.93
MKKS-202ENST00000399054 ATXN8OSP0DMR3 200 aa9.14□□□□□ -0.95
MKKS-202ENST00000399054 U3KPZ7 1027 aaPredicted RBP9.14□□□□□ -0.95
MKKS-202ENST00000399054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.1□□□□□ -0.95
MKKS-202ENST00000399054 HNRNPUL2Q1KMD3 747 aaKnown RBP9.1□□□□□ -0.95
MKKS-202ENST00000399054 PELP1Q8IZL8 1130 aaKnown RBP9.08□□□□□ -0.96
MKKS-202ENST00000399054 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
MKKS-202ENST00000399054 TRIM26Q12899 539 aaPredicted RBP9.05□□□□□ -0.96
MKKS-202ENST00000399054 DCAF1Q9Y4B6 1507 aa9.03□□□□□ -0.96
MKKS-202ENST00000399054 DCAF8L2P0C7V8 631 aa9.02□□□□□ -0.97
MKKS-202ENST00000399054 RNF39Q9H2S5 420 aa9□□□□□ -0.97
MKKS-202ENST00000399054 APLP2Q06481 763 aa8.97□□□□□ -0.97
MKKS-202ENST00000399054 ATF5Q9Y2D1 282 aaPredicted RBP8.96□□□□□ -0.97
MKKS-202ENST00000399054 ZCCHC6Q5VYS8 1495 aaKnown RBP8.94□□□□□ -0.98
MKKS-202ENST00000399054 C1QBPQ07021 282 aaKnown RBP8.92□□□□□ -0.98
MKKS-202ENST00000399054 CCDC180Q9P1Z9 1646 aa8.91□□□□□ -0.98
MKKS-202ENST00000399054 NEUROD1Q13562 356 aa8.9□□□□□ -0.98
MKKS-202ENST00000399054 ZEB1P37275 1124 aaPredicted RBP8.88□□□□□ -0.99
MKKS-202ENST00000399054 FAM9AQ8IZU1 332 aaPredicted RBP8.86□□□□□ -0.99
MKKS-202ENST00000399054 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
MKKS-202ENST00000399054 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
MKKS-202ENST00000399054 ZNF219Q9P2Y4 722 aaPredicted RBP8.82□□□□□ -1
MKKS-202ENST00000399054 SPINK5Q9NQ38 1064 aaPredicted RBP8.82□□□□□ -1
MKKS-202ENST00000399054 CAPN15O75808 1086 aa8.77□□□□□ -1.01
MKKS-202ENST00000399054 TRHP20396 242 aaPredicted RBP8.76□□□□□ -1.01
MKKS-202ENST00000399054 TRIM41Q8WV44 630 aa8.73□□□□□ -1.01
MKKS-202ENST00000399054 DIEXFQ68CQ4 756 aaKnown RBP8.71□□□□□ -1.01
MKKS-202ENST00000399054 CCER1Q8TC90 406 aaPredicted RBP8.7□□□□□ -1.02
MKKS-202ENST00000399054 TTBK1Q5TCY1 1321 aaPredicted RBP8.68□□□□□ -1.02
MKKS-202ENST00000399054 POLA2Q14181 598 aa8.67□□□□□ -1.02
MKKS-202ENST00000399054 YTHDC1Q96MU7 727 aaKnown RBP8.67□□□□□ -1.02
MKKS-202ENST00000399054 MYT1Q01538 1121 aa8.66□□□□□ -1.02
MKKS-202ENST00000399054 CENPBP07199 599 aaPredicted RBP8.65□□□□□ -1.02
MKKS-202ENST00000399054 RTN4Q9NQC3 1192 aaKnown RBP8.64□□□□□ -1.03
MKKS-202ENST00000399054 CACNB1Q02641 598 aaPredicted RBP8.63□□□□□ -1.03
MKKS-202ENST00000399054 DSG3P32926 999 aa8.62□□□□□ -1.03
MKKS-202ENST00000399054 FKBP8Q14318 412 aa8.6□□□□□ -1.03
MKKS-202ENST00000399054 ABCB7O75027 752 aa8.6□□□□□ -1.03
MKKS-202ENST00000399054 MKRN4PQ13434 485 aaPredicted RBP8.59□□□□□ -1.03
MKKS-202ENST00000399054 FBLN2P98095 1184 aa8.58□□□□□ -1.04
MKKS-202ENST00000399054 ZBTB12Q9Y330 459 aaPredicted RBP8.57□□□□□ -1.04
MKKS-202ENST00000399054 RSF1Q96T23 1441 aaPredicted RBP8.55□□□□□ -1.04
MKKS-202ENST00000399054 MIER1Q8N108 512 aa8.54□□□□□ -1.04
MKKS-202ENST00000399054 RB1CC1Q8TDY2 1594 aa8.52□□□□□ -1.04
MKKS-202ENST00000399054 ZNF316A6NFI3 1004 aaPredicted RBP8.5□□□□□ -1.05
MKKS-202ENST00000399054 ABCC9O60706 1549 aa8.48□□□□□ -1.05
MKKS-202ENST00000399054 SPDYE4A6NLX3 237 aa8.47□□□□□ -1.05
MKKS-202ENST00000399054 SCRIBQ14160 1630 aa8.4□□□□□ -1.06
MKKS-202ENST00000399054 PROM2Q8N271 834 aa8.39□□□□□ -1.07
MKKS-202ENST00000399054 SUPT16HQ9Y5B9 1047 aaKnown RBP8.37□□□□□ -1.07
MKKS-202ENST00000399054 CECR2Q9BXF3 1484 aa8.36□□□□□ -1.07
MKKS-202ENST00000399054 OSCARQ8IYS5 282 aa8.36□□□□□ -1.07
MKKS-202ENST00000399054 TSHZ2Q9NRE2 1034 aa8.36□□□□□ -1.07
MKKS-202ENST00000399054 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
MKKS-202ENST00000399054 SPDYE2BA6NHP3 402 aa8.35□□□□□ -1.07
MKKS-202ENST00000399054 SPDYE6P0CI01 402 aa8.35□□□□□ -1.07
MKKS-202ENST00000399054 SPDYE2Q495Y8 402 aa8.35□□□□□ -1.07
MKKS-202ENST00000399054 CEP162Q5TB80 1403 aa8.32□□□□□ -1.08
MKKS-202ENST00000399054 ZNF692Q9BU19 519 aaPredicted RBP8.32□□□□□ -1.08
MKKS-202ENST00000399054 ANP32EQ9BTT0 268 aa8.32□□□□□ -1.08
MKKS-202ENST00000399054 UBTFP17480 764 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms