RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 NISCHQ9Y2I1 1504 aa9.54□□□□□ -0.88
A1CF-205ENST00000374001 DCAF8L2P0C7V8 631 aa8.85□□□□□ -0.99
A1CF-205ENST00000374001 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
A1CF-205ENST00000374001 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
A1CF-205ENST00000374001 CCDC180Q9P1Z9 1646 aa8.32□□□□□ -1.08
A1CF-205ENST00000374001 FAM9AQ8IZU1 332 aaPredicted RBP8.27□□□□□ -1.09
A1CF-205ENST00000374001 APLP2Q06481 763 aa8.24□□□□□ -1.09
A1CF-205ENST00000374001 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
A1CF-205ENST00000374001 ZEB1P37275 1124 aaPredicted RBP8.16□□□□□ -1.1
A1CF-205ENST00000374001 TRIM41Q8WV44 630 aa8.08□□□□□ -1.12
A1CF-205ENST00000374001 ZCCHC6Q5VYS8 1495 aaKnown RBP7.94□□□□□ -1.14
A1CF-205ENST00000374001 CENPBP07199 599 aaPredicted RBP7.91□□□□□ -1.14
A1CF-205ENST00000374001 PCGF6Q9BYE7 350 aa7.9□□□□□ -1.14
A1CF-205ENST00000374001 UBTFP17480 764 aaKnown RBP7.9□□□□□ -1.15
A1CF-205ENST00000374001 TRIM26Q12899 539 aaPredicted RBP7.86□□□□□ -1.15
A1CF-205ENST00000374001 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
A1CF-205ENST00000374001 DCAF1Q9Y4B6 1507 aa7.83□□□□□ -1.16
A1CF-205ENST00000374001 NACADO15069 1562 aa7.83□□□□□ -1.16
A1CF-205ENST00000374001 RB1CC1Q8TDY2 1594 aa7.82□□□□□ -1.16
A1CF-205ENST00000374001 EHMT2Q96KQ7 1210 aa7.81□□□□□ -1.16
A1CF-205ENST00000374001 ABCC9O60706 1549 aa7.81□□□□□ -1.16
A1CF-205ENST00000374001 CHIC1Q5VXU3 224 aa7.78□□□□□ -1.16
A1CF-205ENST00000374001 SCRIBQ14160 1630 aa7.76□□□□□ -1.17
A1CF-205ENST00000374001 MYT1Q01538 1121 aa7.74□□□□□ -1.17
A1CF-205ENST00000374001 NEFLP07196 543 aa7.69□□□□□ -1.18
A1CF-205ENST00000374001 MYO15BQ96JP2 1530 aa7.68□□□□□ -1.18
A1CF-205ENST00000374001 ATP1B4Q9UN42 357 aaPredicted RBP7.68□□□□□ -1.18
A1CF-205ENST00000374001 HRCP23327 699 aa7.67□□□□□ -1.18
A1CF-205ENST00000374001 RANGAP1P46060 587 aaPredicted RBP7.62□□□□□ -1.19
A1CF-205ENST00000374001 TTBK1Q5TCY1 1321 aaPredicted RBP7.61□□□□□ -1.19
A1CF-205ENST00000374001 EEA1Q15075 1411 aa7.6□□□□□ -1.19
A1CF-205ENST00000374001 BAZ1AQ9NRL2 1556 aaPredicted RBP7.59□□□□□ -1.19
A1CF-205ENST00000374001 ACIN1Q9UKV3 1341 aaKnown RBP7.57□□□□□ -1.2
A1CF-205ENST00000374001 ERICH6Q7L0X2 663 aa7.56□□□□□ -1.2
A1CF-205ENST00000374001 LOC105371045A0A1W2PR82 267 aa7.53□□□□□ -1.2
A1CF-205ENST00000374001 PABPN1Q86U42 306 aaKnown RBP eCLIP7.5□□□□□ -1.21
A1CF-205ENST00000374001 CSRNP3Q8WYN3 585 aa7.5□□□□□ -1.21
A1CF-205ENST00000374001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.5□□□□□ -1.21
A1CF-205ENST00000374001 HNRNPUL2Q1KMD3 747 aaKnown RBP7.5□□□□□ -1.21
A1CF-205ENST00000374001 CLSPNQ9HAW4 1339 aa7.49□□□□□ -1.21
A1CF-205ENST00000374001 CDK11AQ9UQ88 783 aaPredicted RBP7.48□□□□□ -1.21
A1CF-205ENST00000374001 SMARCA2P51531 1590 aa7.47□□□□□ -1.21
A1CF-205ENST00000374001 BAZ1BQ9UIG0 1483 aaKnown RBP7.46□□□□□ -1.22
A1CF-205ENST00000374001 RSF1Q96T23 1441 aaPredicted RBP7.45□□□□□ -1.22
A1CF-205ENST00000374001 DIEXFQ68CQ4 756 aaKnown RBP7.43□□□□□ -1.22
A1CF-205ENST00000374001 GOLGA3Q08378 1498 aa7.42□□□□□ -1.22
A1CF-205ENST00000374001 ITGAEP38570 1179 aa7.41□□□□□ -1.22
A1CF-205ENST00000374001 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
A1CF-205ENST00000374001 DAXXQ9UER7 740 aaPredicted RBP7.4□□□□□ -1.23
A1CF-205ENST00000374001 MYT1LQ9UL68 1186 aa7.4□□□□□ -1.23
A1CF-205ENST00000374001 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.23
A1CF-205ENST00000374001 CEP164Q9UPV0 1460 aa7.39□□□□□ -1.23
A1CF-205ENST00000374001 PPARGC1BQ86YN6 1023 aaKnown RBP7.39□□□□□ -1.23
A1CF-205ENST00000374001 KIF27Q86VH2 1401 aa7.37□□□□□ -1.23
A1CF-205ENST00000374001 WRNQ14191 1432 aaPredicted RBP eCLIP7.36□□□□□ -1.23
A1CF-205ENST00000374001 CLIP1P30622 1438 aa7.35□□□□□ -1.23
A1CF-205ENST00000374001 ANP32CO43423 234 aa7.35□□□□□ -1.23
A1CF-205ENST00000374001 TOP2AP11388 1531 aaKnown RBP7.35□□□□□ -1.23
A1CF-205ENST00000374001 ZNF316A6NFI3 1004 aaPredicted RBP7.34□□□□□ -1.23
A1CF-205ENST00000374001 SMARCA4P51532 1647 aa7.33□□□□□ -1.24
A1CF-205ENST00000374001 TRIM52Q96A61 297 aa7.33□□□□□ -1.24
A1CF-205ENST00000374001 FHAD1B1AJZ9 1412 aa7.32□□□□□ -1.24
A1CF-205ENST00000374001 TNIKQ9UKE5 1360 aa7.32□□□□□ -1.24
A1CF-205ENST00000374001 CEP162Q5TB80 1403 aa7.29□□□□□ -1.24
A1CF-205ENST00000374001 TONSLQ96HA7 1378 aa7.29□□□□□ -1.24
A1CF-205ENST00000374001 WIZO95785 1651 aa7.27□□□□□ -1.24
A1CF-205ENST00000374001 MTUS2Q5JR59 1369 aa7.27□□□□□ -1.25
A1CF-205ENST00000374001 POLR3GLQ9BT43 218 aa7.26□□□□□ -1.25
A1CF-205ENST00000374001 ABCC8Q09428 1581 aa7.24□□□□□ -1.25
A1CF-205ENST00000374001 FBLN2P98095 1184 aa7.24□□□□□ -1.25
A1CF-205ENST00000374001 MROH2BQ7Z745 1585 aa7.24□□□□□ -1.25
A1CF-205ENST00000374001 NEFMP07197 916 aa7.24□□□□□ -1.25
A1CF-205ENST00000374001 NEUROD1Q13562 356 aa7.23□□□□□ -1.25
A1CF-205ENST00000374001 SLC24A1O60721 1099 aa7.22□□□□□ -1.25
A1CF-205ENST00000374001 RTL5Q5HYW3 569 aaPredicted RBP7.21□□□□□ -1.25
A1CF-205ENST00000374001 CCDC88BA6NC98 1476 aa7.21□□□□□ -1.26
A1CF-205ENST00000374001 NPM1P06748 294 aaKnown RBP eCLIP7.2□□□□□ -1.26
A1CF-205ENST00000374001 CECR2Q9BXF3 1484 aa7.2□□□□□ -1.26
A1CF-205ENST00000374001 PDS5BQ9NTI5 1447 aa7.2□□□□□ -1.26
A1CF-205ENST00000374001 TSPY4P0CV99 314 aa7.19□□□□□ -1.26
A1CF-205ENST00000374001 TSPY10P0CW01 314 aa7.19□□□□□ -1.26
A1CF-205ENST00000374001 TIMELESSQ9UNS1 1208 aa7.19□□□□□ -1.26
A1CF-205ENST00000374001 CHMP7Q8WUX9 453 aaPredicted RBP7.18□□□□□ -1.26
A1CF-205ENST00000374001 SLC4A1APQ9BWU0 796 aaKnown RBP7.18□□□□□ -1.26
A1CF-205ENST00000374001 ZBTB47Q9UFB7 747 aaPredicted RBP7.18□□□□□ -1.26
A1CF-205ENST00000374001 FMN1Q68DA7 1419 aa7.17□□□□□ -1.26
A1CF-205ENST00000374001 VPS8Q8N3P4 1428 aa7.17□□□□□ -1.26
A1CF-205ENST00000374001 ERCC6Q03468 1493 aa7.17□□□□□ -1.26
A1CF-205ENST00000374001 ESF1Q9H501 851 aaKnown RBP7.15□□□□□ -1.27
A1CF-205ENST00000374001 P3H3Q8IVL6 736 aa7.14□□□□□ -1.27
A1CF-205ENST00000374001 CUX2O14529 1486 aa7.13□□□□□ -1.27
A1CF-205ENST00000374001 CDCA8Q53HL2 280 aa7.13□□□□□ -1.27
A1CF-205ENST00000374001 ZNF326Q5BKZ1 582 aaKnown RBP7.13□□□□□ -1.27
A1CF-205ENST00000374001 PLEKHD1A6NEE1 506 aa7.13□□□□□ -1.27
A1CF-205ENST00000374001 CARMIL1Q5VZK9 1371 aa7.13□□□□□ -1.27
A1CF-205ENST00000374001 CCNB3Q8WWL7 1395 aa7.12□□□□□ -1.27
A1CF-205ENST00000374001 ARHGAP35Q9NRY4 1499 aa7.12□□□□□ -1.27
A1CF-205ENST00000374001 UNC13AQ9UPW8 1703 aa7.12□□□□□ -1.27
A1CF-205ENST00000374001 ZNF777Q9ULD5 760 aaPredicted RBP7.12□□□□□ -1.27
A1CF-205ENST00000374001 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms